Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1189 ATGGTGAAGGGACGCCAAGGAGAGCGAGTCAGACTCTACGTTCGAGGTTCAATCCTTGGTTACAAGAGGTCCAAGTCAAACCAATACCCAAATACATCACTTATCCAGGTCGAGGGAGTGAACTCCAAGGAAGAGGTTGCATGGTACAGTGGCAAGCGAATGGCATACATTTACAAGGCCAAGGTCAAGAAGAACGGAAGCCACTATCGCTGCATTTGGGGTAAGGTTACCCGCCCTCATGGAAACAGTGTTGTCCGGGCCAAATTCAAGTCAAATCTGCCACCCAAATCAATGGGAGCAAGGGTTGCTGCTCTCACAAAAGTCAGTTGTTATGATTCTCTGGTTTTGCTTCTTCCGCACATTATAGCTGATATAGGATAG 381 0.4751 MVKGRQGERVRLYVRGSILGYKRSKSNQYPNTSLIQVEGVNSKEEVAWYSGKRMAYIYKAKVKKNGSHYRCIWGKVTRPHGNSVVRAKFKSNLPPKSMGARVAALTKVSCYDSLVLLLPHIIADIG 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1189 126 Gene3D translation elongation factor selb, chain A, domain 4 6 110 IPR038661 -
Lele28g1189 126 SUPERFAMILY Translation proteins 12 103 IPR009000 -
Lele28g1189 126 FunFam 60S ribosomal protein L35a 7 112 - -
Lele28g1189 126 Pfam Ribosomal protein L35Ae 12 103 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele28g1189 126 PANTHER 60S RIBOSOMAL PROTEIN L35A 2 105 IPR001780 GO:0003735|GO:0005840|GO:0006412
Lele28g1189 126 Hamap 50S ribosomal protein L35Ae [rpl35ae]. 14 105 IPR001780 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1189 Lele-ChrLele28 7762402 7764038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1189 1 105 Cytoplasmic Ribosomal Protein Gene Family AT1G07070 87.736 1.36e-65 192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1190 25 7839753 7841052 Lele28g1189 28 7762402 7764038 hybridization
Lele26g1197 26 7791724 7794018 Lele28g1189 28 7762402 7764038 hybridization