Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1183 ATGGCTATGGACGATCGAAACGTGAGGGGAATGAGCACCGGTTTAACCGATGTGGTCCTGGAACGTGTTATGTCTTTTATTCATGACCCCAAAGATCGAGATGCGGTTTCTCTAGTTTGCCGGCAGTGGTACGAGATGGACTGCTTGACCCGGAAGCACGTGACGATTGCGCTCTGCTACACGACCACCCCGGTCCGACTCCGACGGAGATTTCCACACCTCGAGTCGCTGAAGCTGAAAGGGAAACCGAGGGCGGCGATGTTCAATTTGATTCAGGATGATTGGGGAGGATATGTGGGGCCTTGGATTAAAGAGATTGCAAAATATTTTGATTGTTTGAAGTCGCTTCATTTCCGTCGCATGATTGTGAGGGATTCCGATCTTGAGCTTCTTGCGCGATCACGGGGACACGTGCTTCAAGCTCTTAAACTCGACAAGTGTTCTGGTTTCTCCACGGATGGCCTTTACCATATCGGCCGGTCTTGCAGGAATTTAAGAGTCTTGTTTTTGGAGGAGAGCCAAATTGTTGAGAATGATGGCGAATGGCTACATGAACTTGCTTTGAATAATACTGTTCTTGAGGCTCTAAATTTTTACGTAACAGATCTTATCAATATCAGAATTGAGGACCTTGAACTTATTGCAAAAAACTGTCGCAACTTGGTTTCTGTGAAAATTACTGATATTGAGATCCTGAAGCTTGTAAACTTCTTTCGTTCTGCATCTGCACTAGAGGAGTTTTGTGGAGGCTCCTACAACGAGCAGCCGGAAAAGTACGCTGCTGTATCATTTCCCTCAAGGTTGTGCCGATTGGGTTTGACATATATTGGAAAGAATGAACTTCCAATAGTATTCCCTTTCGCATCCCTTCTAAAAAAGTTGGATCTTCTATATTCGATGTTGGATACAGAGGATCATTGCACACTAATCCAGAAGTGCCCCAACTTGGAAGTCCTTGAGTCAAGGAATGTAATTGGTGATAGAGGGCTCGAAGTTCTTGCACAAAGCTGTAAGAGGCTCAAGAGACTCAGGATTGAGCGAGGAGATGATGAGCAAGGAATGGAGGATGAAGAAGGTGTTGTTTCTCAGAGAGGGTTGATTGCTCTGTCACAGGGCTGTCCAGAACTTGAATATCTGGCTGTTTATGTATCTGACATCACAAATGCATCCCTGGAACATATTGGCACTCACATGAAAAACCTCACCGATTTTCGCCTCGTCTTGCTAGACCGCGAGGCAACCATAACAGATTTACCTCTTGACAATGGGGTGAGAGCTTTATTAAGAGGCTGTGATAAGCTCAGAAGATTTGCTCTGTATCTTCGCTCCGGGGGCTTGACCGACGTTGGCCTCACCTACATCGGGCAATACAGCCAAAACGTGAGATGGATGCTTCTGGGTTATGTAGGGGAATCAGATGAAGGGCTTCTGGAGTTTTCAAGGGGCTGCCCTAGCCTTCAAAAGCTTGAAATGAGAGGTTGTTCCTTCAGTGAGCATGCATTAGCCGTCGTCGCCACACGACTGACTTCTCTAAGGTATCTATGGGTGCAAGGGTATAGACAATCTGCATCTGGGCGTGATCTTTTTGCAATGGCAAGACCCTTCTGGAATATTGAGTTGATTCCTTCTAGGGGAGTTGTTGTTACTTATCAAAGTGGAGAATCTTTTGTGGTTGAGCATCCAGCACATATTCTTGCATATTACTCTCTTGCAGGACCAAGATCAGATTTTCCAGATTCTGTCGTTCCTTTGCATCCAACAGCATATGGTGAAAGTTAG 1779 0.457 MAMDDRNVRGMSTGLTDVVLERVMSFIHDPKDRDAVSLVCRQWYEMDCLTRKHVTIALCYTTTPVRLRRRFPHLESLKLKGKPRAAMFNLIQDDWGGYVGPWIKEIAKYFDCLKSLHFRRMIVRDSDLELLARSRGHVLQALKLDKCSGFSTDGLYHIGRSCRNLRVLFLEESQIVENDGEWLHELALNNTVLEALNFYVTDLINIRIEDLELIAKNCRNLVSVKITDIEILKLVNFFRSASALEEFCGGSYNEQPEKYAAVSFPSRLCRLGLTYIGKNELPIVFPFASLLKKLDLLYSMLDTEDHCTLIQKCPNLEVLESRNVIGDRGLEVLAQSCKRLKRLRIERGDDEQGMEDEEGVVSQRGLIALSQGCPELEYLAVYVSDITNASLEHIGTHMKNLTDFRLVLLDREATITDLPLDNGVRALLRGCDKLRRFALYLRSGGLTDVGLTYIGQYSQNVRWMLLGYVGESDEGLLEFSRGCPSLQKLEMRGCSFSEHALAVVATRLTSLRYLWVQGYRQSASGRDLFAMARPFWNIELIPSRGVVVTYQSGESFVVEHPAHILAYYSLAGPRSDFPDSVVPLHPTAYGES 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1183 592 Gene3D Ribonuclease Inhibitor 52 587 IPR032675 -
Lele28g1183 592 Pfam F-box 13 53 IPR041567 -
Lele28g1183 592 SUPERFAMILY F-box domain 14 47 IPR036047 GO:0005515
Lele28g1183 592 SUPERFAMILY RNI-like 92 405 - -
Lele28g1183 592 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 15 247 - -
Lele28g1183 592 Pfam Transport inhibitor response 1 protein domain 72 118 IPR041101 -
Lele28g1183 592 FunFam Coronatine-insensitive protein 1 52 587 - -
Lele28g1183 592 Gene3D - 3 51 - -
Lele28g1183 592 SUPERFAMILY RNI-like 365 521 - -
Lele28g1183 592 SMART LRR_CC_2 373 397 IPR006553 -
Lele28g1183 592 SMART LRR_CC_2 313 336 IPR006553 -
Lele28g1183 592 SMART LRR_CC_2 136 161 IPR006553 -
Lele28g1183 592 SMART LRR_CC_2 483 507 IPR006553 -
Lele28g1183 592 SMART LRR_CC_2 431 457 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1183 Lele-ChrLele28 7724630 7728618 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1192 26 7759642 7760603 Lele28g1183 28 7724630 7728618 CCT
Lele27g0892 27 16899624 16900574 Lele28g1183 28 7724630 7728618 CCT
Lele28g1184 28 7735073 7736031 Lele28g1183 28 7724630 7728618 CCT
Lele25g1185 25 7800085 7803831 Lele28g1183 28 7724630 7728618 CCT
Lele28g1183 28 7724630 7728618 Lele28g1183 28 7724630 7728618 ECH
Lele25g1185 25 7800085 7803831 Lele28g1183 28 7724630 7728618 hybridization
Lele26g1191 26 7749338 7753330 Lele28g1183 28 7724630 7728618 hybridization