Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1178 ATGCCTTCTCCTTCTTCTATCCTCACTCTACTCTCCCAATGCACTGTATGCCCTACTCAGAAGTCCACCCTCTCAGAACTCAAGCTCTCCATCTCCGACCTTGCCATGCTCTCTTGTCACTACATCCAAAAAGGCTGTCTCTTCCCTCTTCCTTCTTCTCTTCCCTTTCACTCTCTCCTCCCTCACCTCAAGGCCTCTCTCTCTCGCACCCTCTCTCACTTCCCCCCTCTCGCCGGCCGTCTTACTACCGATTCCCACGGCTATGTTTGCATCACCTGCAACGACGCCGGCGTCGACTTCCTCCACGCCACCGCCCCCGGATACTGCATCAACGACCTCTTGTCCCCACCCGATGTTCCTCACACCTTTAGGCATTTCTTCACCCTCGACAAAAAGATCAGTTACAGCGGCCACTTCAGCCCACTTTTGGCCGTTCAGGTCACCGAGCTTGCAGATGGCGTCTTCATCGGTTGTGCAATGAACCATGCCATCGCTGACGGCACGTCGTTCTGGAATTTCTTCAATACCTTTGCCGAAGTTTGTAGAAGAGCCACTAAAATCTCCAACGTACCCGATTTCCGTCGGGATTCGGTTCTTATTTCCAAAGCTGTGCTCCATTTTCCGGAAGGTGGGCCAAAGATCACGTTCAACCCGGACGAGCCATTGAGGGAGAGAATTTTCAATTTCAGCCGAGAAGCCATGCAGAAACTGAAAGCCACCGTGAACAGCCAGAAACTCACAACCAACGAGGAGGTTAACGCCGTCGAGTTGATCGGGAAGCAAAGCAACGACAAATACCATAACAACAAAGGAAAATTGGACGAGATATCGTCGTTCCAGTCACTTTGTGCGCTGCTATGGCGAGGCGTGACGCGGGCGAGGAAGTTGCATCCGTCGAAAACGACAGCGTTTAAGATGGCAGTGAACTGTCGCATGAGGTTAGAGCCCAAATTGAATCCGTACTATTTTGGGAACGCGATTCAGAGCATGCCCACGTATGCAACCGCAGAGGAAGTCGTGTGCAGGGGTCTACGGTGGTGCGCGGAGGAGCTGAACAAGCACGTGAAGGCGTACGATGACGCTACGGTGAGGCGGCTCGTAGAGGAATGGGAAAGTAACCCGAGGTGCTTCCCGCTGGGGAATCCTGATGGTACTTCGGTTACGATGGGGAGCTCGCCAAGATTTCCAATGTACGATAACGACTTTGGGTGGGGGAGGCCAGTGGCGGTTCGGAGCGGCGGAGGGAACAAATTCGACGGGAAGATATCGGCGTTTCCGGGGAGAGAAGGAGGTGGGAGCGTGGATTTGGAGGTGTTATTGGCGCCGGAGACGATGGTGGGGCTGGAATCGGACCCGGAGTTCATGGCGTACGCATCGAGTTCTTGGTGCAATTGA 1395 0.5391 MPSPSSILTLLSQCTVCPTQKSTLSELKLSISDLAMLSCHYIQKGCLFPLPSSLPFHSLLPHLKASLSRTLSHFPPLAGRLTTDSHGYVCITCNDAGVDFLHATAPGYCINDLLSPPDVPHTFRHFFTLDKKISYSGHFSPLLAVQVTELADGVFIGCAMNHAIADGTSFWNFFNTFAEVCRRATKISNVPDFRRDSVLISKAVLHFPEGGPKITFNPDEPLRERIFNFSREAMQKLKATVNSQKLTTNEEVNAVELIGKQSNDKYHNNKGKLDEISSFQSLCALLWRGVTRARKLHPSKTTAFKMAVNCRMRLEPKLNPYYFGNAIQSMPTYATAEEVVCRGLRWCAEELNKHVKAYDDATVRRLVEEWESNPRCFPLGNPDGTSVTMGSSPRFPMYDNDFGWGRPVAVRSGGGNKFDGKISAFPGREGGGSVDLEVLLAPETMVGLESDPEFMAYASSSWCN 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1178 464 Gene3D - 8 206 IPR023213 -
Lele28g1178 464 SUPERFAMILY CoA-dependent acyltransferases 60 183 - -
Lele28g1178 464 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 11 455 - -
Lele28g1178 464 Pfam Transferase family 9 455 - -
Lele28g1178 464 Gene3D - 210 450 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1178 Lele-ChrLele28 7681145 7682539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1178 63 445 Monolignol Biosynthesis Gene Families AT5G48930 29.353 2.77e-35 134