Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1171 ATGAAGTTGAACTGGATGTCAAATTCAACTTTTCAATTCAACTGGATGTTATCCACTGAAACTTTTGCTCAGCTACACCTCCATCCTGCCTTCAAATTTTCTTCCTTTTCTTGGAACACTCCTGAATTCTCACGAATTCATGATCCAATATGCAATGCCTACCCACTTCTCTCTTTGTTTTTTAACTTTCGCCATGGAGTTTCTTCGCCGTTTCAACCAGACCACAACCCGCAGTTATCCCTTCTTCTGGAATATGGCTTTGAGAGTGTGTCATTGTCCCAACTCCCAAGCGACTGCAAAGTTCCTTGTTCAGAGCCCCACGTTCTGTGTCATCCCTAGCAGCTAAGTAGCTTGGCAAGGAGTTCTATGGAGCCATTTTGGACCACGAAGCATGATGTTTTGGAACCTTCTGTGTTGGGTATTGAGCCAGAGCCACCGAGCTGGCCGGAGAGACAGAAAATGCTAAGAGCGTACTTTGAAAGGAAAGCGAACAGTTTGGGAATCCCTTTCTCGATTCGGATGATTCAGAAGAAGCTGCAATGTCAGAAGAGTGTGAAAGAGGCGAATGAATGTACTCAATGTTCTGTGAAGAAGACATTCTCGTCCATGACTCCAAGTCTTATGATTTATACCATGGTCCTCCCAGCAAACTTCTCTGTACTCTCCATTAATAACAACACCGCTCTTGCGGCCACCCCTTTGATTACAGAAGTACGGATGTTAACCGACAAGAAGAATGAAGAAGACTCGGAAATTGATGTTGATGCTGTTTCTGAGAAGAAGATTCTATGGAATTCGATGCTGGACGAAGATAGTAGATTGCAAGAACAATTAAGTAGTGAGGCTTTGACCAATGGGACAACGAAAATATTAGTAGCTCCAGTGCACCTCAACTCTCTTCTGCTTTCTAACTATGCACAGTTCCTCTACCTTGTTTATCATGACGTTGACAGTTCTCCATTTGATTCTAGGAGGGCAGAAGAGTACTTCAGGCTTGCGGTGATGGTGATGACACAAGATGCAGAGGCATTGAGTAGATATGCCGACTTCTTGTGGCTGGTAAGAAAGGATCTAAAGGAAGCATTAGTGAGATGCCTGGAAGCAATGGAGGTCGATCCTGACAGCAATCATTACAAGTCCAAGTATGCCACTTTTATGTGGAGCACCGGTGACCTAGGAACTTGTTCTCCTTCCTCAGAAAACTTTGACAGCTTCAACTCAGTCCTATGA 1230 0.4407 MKLNWMSNSTFQFNWMLSTETFAQLHLHPAFKFSSFSWNTPEFSRIHDPICNAYPLLSLFFNFRHGVSSPFQPDHNPQLSLLLEYGFESVSLSQLPSDCKVPCSEPHVLCHPXQLSSLARSSMEPFWTTKHDVLEPSVLGIEPEPPSWPERQKMLRAYFERKANSLGIPFSIRMIQKKLQCQKSVKEANECTQCSVKKTFSSMTPSLMIYTMVLPANFSVLSINNNTALAATPLITEVRMLTDKKNEEDSEIDVDAVSEKKILWNSMLDEDSRLQEQLSSEALTNGTTKILVAPVHLNSLLLSNYAQFLYLVYHDVDSSPFDSRRAEEYFRLAVMVMTQDAEALSRYADFLWLVRKDLKEALVRCLEAMEVDPDSNHYKSKYATFMWSTGDLGTCSPSSENFDSFNSVL 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1171 409 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 165 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1171 Lele-ChrLele28 7653344 7655620 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1152 28 7495557 7495976 Lele28g1171 28 7653344 7655620 CCT
Lele25g1164 25 7577944 7579902 Lele28g1171 28 7653344 7655620 CCT
Lele28g1171 28 7653344 7655620 Lele28g1171 28 7653344 7655620 ECH
Lele25g1177 25 7738359 7740074 Lele28g1171 28 7653344 7655620 hybridization
Lele26g1179 26 7674361 7674996 Lele28g1171 28 7653344 7655620 hybridization