Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1168 ATGCCACTCACTAAGTCTTCCGTGCTCGCTGAGTTTTCCTCTTCCCATAATATACCTCCATTCTCTGAACCTGCATTTATCACCTTAACCGATTTGCGTAATAGCAGGGGAGCCGCACCGGATTTCAACTTCATCAATGTGTATTTATGGCTCTTCCACTCTTGGAATTTGTGTGTTCATACAGAGATACTTAGAGACACTAAATATTTTCCATCTCTGAGCATAGCCGCAAGAACAGCCCTATCAGGTCCTTGTAAACCCGACGCAATGTCGCACCAGAAGCAAGCCGAAGAAGCCATAATGCCGAGCAGGAATCCGACGACTGAGCGTGATGAGAGAGAGGAAGGAGAGAAAGGGGATGGCTCTGCTTTTACCTTCAAATCCTTTCTCTGGCATGGCGGCTCTGCCTATGATGCCTGGTTCAGCTGCGCCTCGAATCAGGTTGCCCAAGTTCTGTTGACGCTGCCGACTTCTTTCTCCCAACTGGGAATGCTTTCGGGCATCATATTTCAAATATTCTATGGTTTCCTTGGAAGCTGGACTGCTTACTTGATCAGCATTCTATACATCGAGTACCGAAGCCGGAAAGAGAAAGAAAACGTCAGCTTCAAAAACCACGTCATTCAGTGGTTCGAAGTGTTGGATGGTTTATTGGGTCCTTATTGGAAAGCTATCGGACTGGCTTTCAACTGCACTTTTCTCCTCTTTGGCTCTGTTATCCAGCTTATTGCCTGTGCAAGTAATATATACTACATAAACGACAAACTGGACAAGAGGACATGGACTTACATTTTTGGAGCTTGTTGTGCCACCACCGTTTTCATACCCTCGTTCCATAATTACCGGATATGGTCCTTCCTTGGCCTTGGAATGACAACTTACACCGCTTGGTATTTGACCATCGCAGCCGCCGTACATGGCCAGGTTGAGAATGTGACGCACTCGGGCCCAAACAAACTGGTTCTGTATTTCACAGGCGCCACCAATATACTATACACTTTCGGCGGGCACGCCGTCACAGTGGAAATCATGCATGCAATGTGGAAGCCTCAGAAGTTCAAATACATATATCTCTTCGCCACAATCTATGTGTTCACCCTCACGATACCATCGGCAGCCACTGTGTACTGGGCCTTCGGAGACCAACTCCTCCATCAGTCCAATGCCTTGGCGCTCCTCCCTCGCACCGGCTGGCGTGATCTCGCTGTTATTCTAATGCTCATTCACCAGTTCATAACATTTGGGTTTGCTTGTACGCCGTTGTATTTTGTGTGGGAAAAAGTGATAGGAATGCATGACACAAGGAGCATATTTTTGAGGGCTCTTGCTAGGTTGCCTGTGGTCATACCAATATGGTTCTTGGCCATCATTTTCCCCTTCTTCGGTCCCATCAACTCCGCCGTAGGCGCTCTCCTTGTCAGCTTCACCGTCTACATCATCCCCTCCCTCGCCCATATGCTCACTTACAGGTCTGCCTCAGCACGTCAGAATGCTGCAGAAAAACTTCCGAGTTTCATACCGAACTGGGCGACGATGTTCGTGGTGAATGCGTTCGTGGTGGCGTGGGTTTTGGTGGTAGGGTTTGGATTTGGTGGGTGGGCTAGCCTCACTAATTTCATTGACCAAGTTGGTACCTTCGGCCTATTTGCCAAGTGCTATCAGTGCCATCCCAAGCCGCCTCCTCGTTTCAATCACACAGCACTTACTCATGTCTGA 1716 0.4837 MPLTKSSVLAEFSSSHNIPPFSEPAFITLTDLRNSRGAAPDFNFINVYLWLFHSWNLCVHTEILRDTKYFPSLSIAARTALSGPCKPDAMSHQKQAEEAIMPSRNPTTERDEREEGEKGDGSAFTFKSFLWHGGSAYDAWFSCASNQVAQVLLTLPTSFSQLGMLSGIIFQIFYGFLGSWTAYLISILYIEYRSRKEKENVSFKNHVIQWFEVLDGLLGPYWKAIGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYLTIAAAVHGQVENVTHSGPNKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLFATIYVFTLTIPSAATVYWAFGDQLLHQSNALALLPRTGWRDLAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTRSIFLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRSASARQNAAEKLPSFIPNWATMFVVNAFVVAWVLVVGFGFGGWASLTNFIDQVGTFGLFAKCYQCHPKPPPRFNHTALTHV 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1168 571 MobiDBLite consensus disorder prediction 104 120 - -
Lele28g1168 571 MobiDBLite consensus disorder prediction 83 120 - -
Lele28g1168 571 Pfam Transmembrane amino acid transporter protein 132 525 IPR013057 -
Lele28g1168 571 PANTHER OS05G0424000 PROTEIN-RELATED 138 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1168 Lele-ChrLele28 7618012 7621760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1168 90 566 Organic Solute Cotransporters AT2G21050 74.227 0.0 746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1176 26 7655894 7657806 Lele28g1168 28 7618012 7621760 CCT
Lele27g0904 27 17001922 17003838 Lele28g1168 28 7618012 7621760 CCT
Lele28g1169 28 7636332 7638230 Lele28g1168 28 7618012 7621760 CCT
Lele25g1174 25 7663490 7666752 Lele28g1168 28 7618012 7621760 CCT
Lele26g1157 26 7490783 7494089 Lele28g1168 28 7618012 7621760 CCT
Lele27g0922 27 17148637 17153282 Lele28g1168 28 7618012 7621760 CCT
Lele28g1150 28 7482135 7485334 Lele28g1168 28 7618012 7621760 CCT
Lele25g1159 25 7521680 7524962 Lele28g1168 28 7618012 7621760 CCT
Lele27g0906 27 17017612 17020825 Lele28g1168 28 7618012 7621760 ECH
Lele28g1168 28 7618012 7621760 Lele28g1168 28 7618012 7621760 ECH
Lele25g1174 25 7663490 7666752 Lele28g1168 28 7618012 7621760 hybridization
Lele26g1175 26 7632645 7636402 Lele28g1168 28 7618012 7621760 hybridization