Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1162 ATGAATCGTAGTTTCAGGGCGCCGGAGTCGCAAATGCAAGCGGCTTTAAAGCAGAGGCAGAAGCAAATGGGGGGATTAAGGTCTTCGATGATGAAGGAGAAGGATGAGGAACTTGCATTATTCCTGGAGATGAAAAAGCGCGAGAAGGAACGTAGTGATCTTCTGCTGCACAGCCCTGAGGAGTTCGATGCGCCACTAAGTTCGATAGGCTCAAATCCGGGTACTTCACCCATATTTAATATTGCAGCATCTACGCCAGCTCCTGCACGTAAGACTGGTGCTGATGATTTTCTCAATTCAGAAAATGATAAAAATGACTATGACTGGCTTCTAACTCCTCCCGGGACTCCTCTTTTTCCTTCTCTGGAGATGGAATCACGAAAGACTGTCATGAGTCAGCTTGGTCCTCCAACCACACGTCCCACTGCATTAAAATCAAGATTGGCAAATCCAACATTAGAGCCTGCTGGAAGGGGCAGCTTAGCATCTAGACAACCATCCACCTCCCCTGGGTTGAGCTCTTCGAGCAGTGGCATACGTAGGCCCTCATCATCAGGGGGTCCAGGATCAAGACCTGCAACTCCTACTGGACGTCCAACATTGACCTCATCTTCAAAACCATCAAGACCTTCAACACCTACTTCTCGGGCCACCATGTCTTCAACCAGGGCCACTATAACTGCTTCCAAGCCCACGGCAACAAAGGTTGCAGTTTCTGCTTCCAAAACCACAGTCCCTGCAGCTAAATCCACAACTCCATCAAGATCCTCTACACCTTTGTCCAGGTCTACTGCTAGGTCGTCAACACCAACTTCTAGGCCTACCTTGCCTTCATCCAGGCCCGCATCAAGGGCATCAACTCCAACTCGGCGGCCATCCACACCATCAAGTGCATCCACTGCTCCTTCGGTTAGGACAACTTCTATTTCCAGGCCTGCTCCCATGACATCAAGGCAGCCGACTCCTGTGACGTCGAGGCAGCCAACTCCTGTGAAATCTAGGCAACCAGTTTCGACGACTTCAAAGCAATCAGTACCATCATATGGTGCTTCACCCCCAGCAAGACCAAGACCTTGGAAGCCATCTGAGATGCCTGGTTTTTCTCTTGATGCTCCTCCCAATTTGAGGACAACGCTACCTGATAGGCCACTGTCAGCAACTAGGGGCAGGCCCGGAGCACCCATTTCTCGGTCCTCATCTGTTGAGCCTGGTCCTAGTGGAAGACCTAAGAGGCAATCATGTTCTCCCTCAAGAGGGCGTTCATCCAATGGCATGGTTCATATGAGTGGAAGCTCTATGCCAGCAGTTAGCCGTGGGCACTCCAAAGTGAATGATAATGTCAGCCCTGTAGTAATTGGCACCAAAATGGTTGAGAGGGTTATAAATATGCGTAAATTGGTGCCACCGAGGATGGATGACAAAAATTCTCCCCATAGTAATATCTCAGGCAAGTCATCTACATCTCCTGAAAGCTCAGGCTTTGGAAGGACACTCTCTAAGAAATCCCTGGATATGGCTATCAGGCATATGGATATAAGGCGAACCATTCCTGGGAACTTGAGGCCATTAATGACAAATATTCCCGCATCATCGATGTATAGTGTGAGGTCAGGGTCCCAACGAAGCCGGACAGTCAGCATGTCGGGTTCGCCTCATGCCACGAGCAGCAATGCTGGTTCTGAAGTGAGTGTAAATAACAATGGACTTTGCTTAGACAGTAGTGAAGTAGATGATGATATTGTCAGTGAGAGAGGCGGTCAATCCCCGGCGAGCGTACGAGGCAGGCATATTGGGTTTGGATATGGAACTAACCATGTTCTGTTGTAA 1827 0.4932 MNRSFRAPESQMQAALKQRQKQMGGLRSSMMKEKDEELALFLEMKKREKERSDLLLHSPEEFDAPLSSIGSNPGTSPIFNIAASTPAPARKTGADDFLNSENDKNDYDWLLTPPGTPLFPSLEMESRKTVMSQLGPPTTRPTALKSRLANPTLEPAGRGSLASRQPSTSPGLSSSSSGIRRPSSSGGPGSRPATPTGRPTLTSSSKPSRPSTPTSRATMSSTRATITASKPTATKVAVSASKTTVPAAKSTTPSRSSTPLSRSTARSSTPTSRPTLPSSRPASRASTPTRRPSTPSSASTAPSVRTTSISRPAPMTSRQPTPVTSRQPTPVKSRQPVSTTSKQSVPSYGASPPARPRPWKPSEMPGFSLDAPPNLRTTLPDRPLSATRGRPGAPISRSSSVEPGPSGRPKRQSCSPSRGRSSNGMVHMSGSSMPAVSRGHSKVNDNVSPVVIGTKMVERVINMRKLVPPRMDDKNSPHSNISGKSSTSPESSGFGRTLSKKSLDMAIRHMDIRRTIPGNLRPLMTNIPASSMYSVRSGSQRSRTVSMSGSPHATSSNAGSEVSVNNNGLCLDSSEVDDDIVSERGGQSPASVRGRHIGFGYGTNHVLL 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1162 608 PANTHER GASTRIC MUCIN-LIKE PROTEIN 21 590 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 68 82 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 399 446 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 63 446 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 161 348 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 475 497 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 533 565 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 1 25 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 126 146 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 466 497 - -
Lele28g1162 608 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1162 Lele-ChrLele28 7585376 7589397 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1170 25 7632686 7636571 Lele28g1162 28 7585376 7589397 CCT
Lele26g1153 26 7446381 7451113 Lele28g1162 28 7585376 7589397 CCT
Lele27g0927 27 17204610 17210856 Lele28g1162 28 7585376 7589397 CCT
Lele28g1146 28 7438307 7444097 Lele28g1162 28 7585376 7589397 CCT
Lele27g0909 27 17046302 17052013 Lele28g1162 28 7585376 7589397 ECH
Lele28g1162 28 7585376 7589397 Lele28g1162 28 7585376 7589397 ECH
Lele25g1170 25 7632686 7636571 Lele28g1162 28 7585376 7589397 hybridization
Lele26g1169 26 7602383 7606402 Lele28g1162 28 7585376 7589397 hybridization