Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1161 ATGGGATTTGGTACGCTTGTAAATTCGTTTGCTCACCCGATTTCGTATGTGTTAGAATTGTTCCACCGTCCTATCCAAAGACACGAATGTGATGAGAATAGCTTGTGGGCACAGAGCCTTACGGTGAATGATTACCAAGATCTTCTTGATCGGGGATGGAGAAGATCTGGATGTTTTCTTTACAAACCAGAGATGGAAAGGACTTGCTGCCCTTCTTATACAATTCGCATGAAAGCGAGTGACTTTGGTCCTTCTAAAGAGCAACTTCGTGTATCTAAACGGATGCAAAGGTTTCTAGATGGCAAGTTGGATGTCAAAAAAGTTGATGTTTTGGAGCGCCCAACTACTTCTAATGAATCCAACCATGAATCCTCAAGCTCCGTGTCAAAAGACTCCCCCTCTACTTGTAATGAAGAGAAAAATGAGATTGAGAAAGTTTTGCGCTACTTATCAAATAAAATTGATGATGCAGTTTGCATGTTCACTAATAAGGAAGAATTTCCCTCTGGTTTTCAGTTACCAAAAGCGTCAGTTAAAACAGTTTCACCTGGGAAAAGGAATTTACTAGTTAATGGATCAGAAGATCTCCTCTACAGTAGCAACATAGCATTCCAAATTGCAGCTTCTATAAAGCGAGCACAACTAGGTGACAAAAATGCCCATCAGTCAAAATTGTCAGGAGATTGTACAGAAGAAAATGACTTGTCCCCTAAAGTTATTGCTGAAAAGTTGGCAACATCTGTAGCTCAAACTTTAAAGGGTTCCGATATATCTGTAAGATCTTGCAATGGACACATCAATTTTTATTCCTCCACTAAGCAAGTTTCCTCAAGTGAAGGTGCTCAAAATGCTTCAACTCCTAAAAATTCTGGTATAAAGCGTGGGAGTGAAGGAAACTGTTTGAATAACCCTCAATGTAGTCAAGTGAAAAGCCGAAGCCTTGAGCTTCGCTTGAAAAGATCAAGTTTTGATCCAGAAGAATATGCTTTGTATAGAAGATATCAGCTCATAGTACATAATGATAAACCTGACCATGTCACTGAGAGCTCATATAGAAGGTTTCTGGTTGATACTCCATTGTTATATGTTGCTTCATTTGGGGATGGAACAGCTCCTCCTTGTGGTTTTGGCTCCTTTCATCAGCAATATTTAATAGATGGCCGATTAGTGGCAGTTGGTGTTATAGATATCCTCCCAAAATGTTTATCTAGTAAATATTTGTTCTGGGATCCCGACTTTGCTTTCTTATCTCTGGGCAAGTATTCAGCACTCCAAGAAATAGGCTGGGTGAAAGAAAACCAAGTTCATTGTTCCAGCCTTCAGTACTATTATCTTGGCTACTATATTCACTCTTGCAGCAAGATGAGATACTGA 1374 0.3952 MGFGTLVNSFAHPISYVLELFHRPIQRHECDENSLWAQSLTVNDYQDLLDRGWRRSGCFLYKPEMERTCCPSYTIRMKASDFGPSKEQLRVSKRMQRFLDGKLDVKKVDVLERPTTSNESNHESSSSVSKDSPSTCNEEKNEIEKVLRYLSNKIDDAVCMFTNKEEFPSGFQLPKASVKTVSPGKRNLLVNGSEDLLYSSNIAFQIAASIKRAQLGDKNAHQSKLSGDCTEENDLSPKVIAEKLATSVAQTLKGSDISVRSCNGHINFYSSTKQVSSSEGAQNASTPKNSGIKRGSEGNCLNNPQCSQVKSRSLELRLKRSSFDPEEYALYRRYQLIVHNDKPDHVTESSYRRFLVDTPLLYVASFGDGTAPPCGFGSFHQQYLIDGRLVAVGVIDILPKCLSSKYLFWDPDFAFLSLGKYSALQEIGWVKENQVHCSSLQYYYLGYYIHSCSKMRY 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1161 457 MobiDBLite consensus disorder prediction 110 137 - -
Lele28g1161 457 Pfam Arginine-tRNA-protein transferase, C terminus 326 457 IPR007472 GO:0004057|GO:0016598
Lele28g1161 457 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 324 453 IPR016181 -
Lele28g1161 457 Pfam Arginine-tRNA-protein transferase, N terminus 32 88 IPR007471 GO:0004057|GO:0016598
Lele28g1161 457 MobiDBLite consensus disorder prediction 114 134 - -
Lele28g1161 457 MobiDBLite consensus disorder prediction 276 299 - -
Lele28g1161 457 PIRSF ATE1_euk 27 457 IPR017137 GO:0004057|GO:0016598
Lele28g1161 457 PANTHER ARGININE-TRNA-PROTEIN TRANSFERASE 1 32 457 IPR030700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1161 Lele-ChrLele28 7575684 7578720 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1161 28 7575684 7578720 Lele25g1168 25 7616395 7620438 CCT
Lele28g1161 28 7575684 7578720 Lele26g1167 26 7586489 7590360 CCT
Lele28g1161 28 7575684 7578720 Lele27g0911 27 17064114 17068142 CCT
Lele28g1161 28 7575684 7578720 Lele28g1159 28 7563425 7567281 CCT
Lele28g1161 28 7575684 7578720 Lele28g1161 28 7575684 7578720 ECH
Lele25g1169 25 7621253 7625624 Lele28g1161 28 7575684 7578720 hybridization
Lele26g1168 26 7592121 7596988 Lele28g1161 28 7575684 7578720 hybridization