Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1159 ATGTACGAATTAAAGTACTCTCTTATGCTTTTGTATGATGCTGTATGTATTATGTTTTTTTATTGTACTCCATCCATGATATGGTATAAGCACAACATCCAACCATAGTTGTTCTCTGGGTCGAGATTCAAGTCATGGGGAGGTTGTTTATGGTCAATCTTGAGGGGAAGATCTATAGCTGCAAACACTGCCGTACCCATCTCGCTCTTGTTGAAGACATCGTATCCAAGGTTTTATCGCTTTGTATCTCTTAGTGAAATGTGCTCCTTCTATAGGAGTGTTGTTAACTTGATACCATTGCTTCGATCCAGCAATTTTTCACTAGACATTGACTACAATTTTGTCTCTGTTTTATTCAGTCTTTCCACTGCAGACATGGGAAAGCTTATCTCTTCAATAAGTGTGAACGTTTCTGTTGGAGAAAAGGAGGAGAGGATGATGATGACTGGGTTGCATACTGTGGCTGACATTTTCTGTGTGGGTTGTGGATCAATTGTGGGGTGGAAATATGAGACTGCCTATGAAAAAAGCCAGAAGTACAAGGAAGGAAAGTCTGTTCTTGAGCGGTACAAGGTTGCAGGTCCTGATGGAAGCAATTATTGGGTCAGTCATGATGCACATGTTGCTGGAAGTGATGCAGATGATGTCTAA 651 0.4071 MYELKYSLMLLYDAVCIMFFYCTPSMIWYKHNIQPXLFSGSRFKSWGGCLWSILRGRSIAANTAVPISLLLKTSYPRFYRFVSLSEMCSFYRSVVNLIPLLRSSNFSLDIDYNFVSVLFSLSTADMGKLISSISVNVSVGEKEERMMMTGLHTVADIFCVGCGSIVGWKYETAYEKSQKYKEGKSVLERYKVAGPDGSNYWVSHDAHVAGSDADDV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1159 216 ProSiteProfiles Yippee domain profile. 97 196 IPR034751 -
Lele28g1159 216 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 134 192 IPR004910 -
Lele28g1159 216 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 131 193 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1159 Lele-ChrLele28 7563425 7567281 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1168 26 7592121 7596988 Lele28g1159 28 7563425 7567281 CCT
Lele27g0910 27 17058916 17062744 Lele28g1159 28 7563425 7567281 CCT
Lele28g1161 28 7575684 7578720 Lele28g1159 28 7563425 7567281 CCT
Lele25g1168 25 7616395 7620438 Lele28g1159 28 7563425 7567281 CCT
Lele25g1154 25 7459199 7465760 Lele28g1159 28 7563425 7567281 CCT
Lele27g0911 27 17064114 17068142 Lele28g1159 28 7563425 7567281 ECH
Lele28g1159 28 7563425 7567281 Lele28g1159 28 7563425 7567281 ECH
Lele25g1168 25 7616395 7620438 Lele28g1159 28 7563425 7567281 hybridization
Lele26g1167 26 7586489 7590360 Lele28g1159 28 7563425 7567281 hybridization