Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1158 ATGGCTGCCACCGCCACCTCATACTTCTTCGGCTCGCGGCTAGCCACCAACAATCCCGCCTCTGACTCCGGCAGATTCCACGCCCTGCTTAAGTTCGGTACCAAGAAGAAGGCCGCCCCGCCTCCTCCGCCCCCTAAGAAAGCGCCGTCCAACACCAAACCATCTGGAGACCGGCTCGTGTGGCTCCCCGGTGCCCAACCACCGGATTGGCTCGACGGAACCATGGTAGGAGACCGTGGGTTCGATCCATTTGGGTTGGGGAAACCCGCCGAGTATTTGCAGTTCGACTTGGACTCGCTGGATCAGAATCTGGCTAAGAATGTGGCAGGAGAAATAATCGGAACCAGAGTGGAGATCACGGAGGTTAAACCAACGCCGTTCCAGCCGTACGCTGAGGTGTTCGGGTTGCAGAGGTTCCGCGAGTGTGAGCTGATTCATGGAAGGTGGGCAATGCTGGGAGCACTCGGTGCCTTGGCCGTTGAAGCATTTACGGGAGTTGCCTGGCAAGACGCTGGAAAGGTGGAGCTGGTGGAAGGGTCGTCCTATCTGGGGCTTCCTCTTCCCTTCTCATTGACCACACTGATCTGGATCGAGGTGATATTGATAGGCTACATTGAATTCCAAAGAAACGCAGAACTTGACCCAGAAAAGAGGATATACCCAGGTGGCAAGTTCTTTGATCCCCTCGGCTTGGCCAACGACCCCGAAGAGAGGGCCAGACTTCAACTTGCAGAGATCAAGCACTCCAGGTTAGCCATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACAGGCAAAGGTCCCATCGCTTTTATTGCTACCTTTAACAAGTGA 840 0.5488 MAATATSYFFGSRLATNNPASDSGRFHALLKFGTKKKAAPPPPPPKKAPSNTKPSGDRLVWLPGAQPPDWLDGTMVGDRGFDPFGLGKPAEYLQFDLDSLDQNLAKNVAGEIIGTRVEITEVKPTPFQPYAEVFGLQRFRECELIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGSSYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRIYPGGKFFDPLGLANDPEERARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIAFIATFNK 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1158 279 Pfam Chlorophyll A-B binding protein 67 263 IPR022796 -
Lele28g1158 279 Gene3D Chlorophyll a/b binding protein domain 59 279 - -
Lele28g1158 279 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 31 275 IPR001344 GO:0009765|GO:0016020
Lele28g1158 279 MobiDBLite consensus disorder prediction 31 58 - -
Lele28g1158 279 SUPERFAMILY Chlorophyll a-b binding protein 55 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1158 Lele-ChrLele28 7561289 7563301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1158 10 276 Chloroplast and Mitochondria Gene Families AT3G08940 70.037 6.87e-133 376
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1158 28 7561289 7563301 Lele28g1158 28 7561289 7563301 ECH
Lele25g1167 25 7614331 7616260 Lele28g1158 28 7561289 7563301 hybridization
Lele26g1166 26 7584313 7586357 Lele28g1158 28 7561289 7563301 hybridization