Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1152 ATGAGCAAGTTTGATTCCTCCTCCGCCGTCACCGAATCTGCCATGGAAGATCCCTCCGGCCCCCGCCAAAACCTACCTGAGAAGCGACGCCACCACCCCTCCCCGACTACCACCATCAGCACCACCACCACTACCGGGGACTCTGACGGAGAAGTGGAGGCGGCCGAACAAGGCGACCCCAAGGCGTGGGTGGCTTTTAACAAGAGCTTCCGGCAGGTGCAGTCGGTGTTGGATCGTAACCGCCTTCTGATTCAGCAGGTGAACGAGAACCACCAGTCTAGGATTCCCGACAATATGGTGAAGAACGTGTCCTTGATTCAGGAGCTCAACGGAAATATCTCCAAGGTCGTCTCTCTTTACTCTGATCTCAATTCTAATTTCTCCACCATGTGCCAGCAACGCGCCGATAATCGAGACTGA 420 0.5524 MSKFDSSSAVTESAMEDPSGPRQNLPEKRRHHPSPTTTISTTTTTGDSDGEVEAAEQGDPKAWVAFNKSFRQVQSVLDRNRLLIQQVNENHQSRIPDNMVKNVSLIQELNGNISKVVSLYSDLNSNFSTMCQQRADNRD 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1152 139 MobiDBLite consensus disorder prediction 35 50 - -
Lele28g1152 139 MobiDBLite consensus disorder prediction 1 59 - -
Lele28g1152 139 PANTHER PROTEIN ELF4-LIKE 4 44 136 IPR040462 GO:0042753
Lele28g1152 139 MobiDBLite consensus disorder prediction 1 18 - -
Lele28g1152 139 Pfam Early Flowering 4 domain 58 137 IPR009741 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1152 Lele-ChrLele28 7495557 7495976 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1161 25 7535674 7536847 Lele28g1152 28 7495557 7495976 CCT
Lele26g1149 26 7395986 7397407 Lele28g1152 28 7495557 7495976 CCT
Lele27g0931 27 17255749 17257064 Lele28g1152 28 7495557 7495976 CCT
Lele28g1141 28 7394295 7395718 Lele28g1152 28 7495557 7495976 CCT
Lele25g1150 25 7417077 7428474 Lele28g1152 28 7495557 7495976 CCT
Lele28g1152 28 7495557 7495976 Lele25g1177 25 7738359 7740074 CCT
Lele28g1152 28 7495557 7495976 Lele26g1179 26 7674361 7674996 CCT
Lele28g1152 28 7495557 7495976 Lele27g0903 27 16985724 16987085 CCT
Lele28g1152 28 7495557 7495976 Lele28g1171 28 7653344 7655620 CCT
Lele25g1161 25 7535674 7536847 Lele28g1152 28 7495557 7495976 hybridization