Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1150 ATGAATTTCCGCATCTCCTTTCTCACTCTGTGTTTTCTGAATCCCTTCCAGAAAAACCAGGAGGAAGAGGAAGAAGAAGGGGGGATTGTTGAAAGCATGAAGACATATAACAAGTACAAGCGGCTCTTGTTCTTCACCAGAAAGTACAAGAGCAACGATCTGGTTCCACCTCGTGACCTCAAGGAGGCCTTCTCCAACTTCGCCGGCGGCCGGAATCTCATGTCCGTCGGCCAGTTCCGGCTGTTCCTGGTGGAGCACCAAGGCCACGTGGACTGCACCGTATCGGAATCGGAGGAAATCGTCGACAAGATCCTGAAAGCTCGAAAGGGAAGTCACGACGATGGTCAACGAACTGAACAACAACAACAACAACATGGACTCACTCTCGAATACATCTTCCATTTTCTTCTTCTCGATGATTTCAAAAGTCCTCTGAAATATGAGGTTCATCATGATATGGAAGCCCCGTTATCACACTATTTCATATACACAGGGCATAATTCATATCTTACTGGGAATCAATTGAGTAGTGATTGCAGTGAAGAACCGATCATTAAGGCTCTACAACGCGGCGTGAGGGTCATCGAACTAGATTTATGGCCTACGTCCAACAAAGATGATATTAAAGTAGTTCATGGATGGACTTTTACCAATCCTGTTTCGCCTCATAAATGTTTGGAGGCTATAAAGAAATATGCTTTTGTGAAATCTGAGTACCCAGTTATTATAACTATTGAAGACCATCTTACAAGAGATCTTCAAGCTAAATTTGCAGAGATGGCTACTCAAATACTAGGAGAGTTGCTATATTATCCTCAGGGGAAACCTTTGACAGAATTCCCATCACCAAAATCATTGAAAAACAAAATAATTATATCCACCAAACCTCCAAAAGAACATCTTTGTAAATGTATTGAAGATAAAGGAAACAACGATGTGCAAGATGAAAGTGAATCATCCGAAGAAGAAACATCATGGGGACAAGAATCGCCAGACTCCATGACTGAACCAGAGACAACTGAGAACAAAGTGGCTGAACCAGAAACTGAGAACAAGATGAGTCAGAATAGAAGTGATAAAGAAGAGAGAGATTCAAATGGAGGTGATGAACAACATAGGACAGATCAAAAGTGTTCAGCTGATTATAAACTCTTGATTACAATCCATGCGAAGAAACTCAAGGGAAGCCTGAAGGATAAATTGAGGATTGAAGAAGAAGTTAGACGCCTAAGTTGGAATGAGCAGACACTTGAAAGGGCTTGTGAATCTCATGGAACTGATATTATAAGGTTCACACAGAGAAACATCCTCAGGGTATACCCAAAAGGAACACGTGTCCAATCCTCAAATTTCAAGCCACATAAAGGGTGGATGTATGGGGCTCAAATGGTGGCATTCAATATGCAGAAGCATGGGAAGGAGCTATGGTTGATGCAGGGAATGTTCAGGGCAAATGGGGGGTGTGGTTACGTGAAAAAACCAGAAATAGTAATGCAGAATCTTCCAAATGGTGAACTGTTTGATCCTAAAAGAACATTGCCAGTGAAAACGACATTAAAGGTAAATGTGTACATGGGACATGGCTGGAGCTCAGATTTCAGTCCCACCCACTTTGACAAGTTCTCTCCACCAGACTTCTACACAAAGGTATGTATTGTTGGAGTGCCACCTGACTGTGCCAGGAAGAGCACAAGGGTAATAATGGACAATTGGTTTCCTGTTTGGGAAGAGGAATTCCAATTCCCTTTAACGGTCCCAGAGCTGGCACTGCTTAGGATAATAGTGAGGGAGAAAGACCAGGGAAAGGATGACTTTGGAGGGCAGACATGTTTGCCAGTCTCAGAGCTAAGACTTGGATTTCGTTCAGTCCCTTTGTATAACAGAAAGGGAGAGAAATACAAATCTGTAAAGCTTTTCATGCGGTTTCAGTTCATTGACCAAGAAGAAAATGCAGTTTCAGTCAAATGA 1968 0.4243 MNFRISFLTLCFLNPFQKNQEEEEEEGGIVESMKTYNKYKRLLFFTRKYKSNDLVPPRDLKEAFSNFAGGRNLMSVGQFRLFLVEHQGHVDCTVSESEEIVDKILKARKGSHDDGQRTEQQQQQHGLTLEYIFHFLLLDDFKSPLKYEVHHDMEAPLSHYFIYTGHNSYLTGNQLSSDCSEEPIIKALQRGVRVIELDLWPTSNKDDIKVVHGWTFTNPVSPHKCLEAIKKYAFVKSEYPVIITIEDHLTRDLQAKFAEMATQILGELLYYPQGKPLTEFPSPKSLKNKIIISTKPPKEHLCKCIEDKGNNDVQDESESSEEETSWGQESPDSMTEPETTENKVAEPETENKMSQNRSDKEERDSNGGDEQHRTDQKCSADYKLLITIHAKKLKGSLKDKLRIEEEVRRLSWNEQTLERACESHGTDIIRFTQRNILRVYPKGTRVQSSNFKPHKGWMYGAQMVAFNMQKHGKELWLMQGMFRANGGCGYVKKPEIVMQNLPNGELFDPKRTLPVKTTLKVNVYMGHGWSSDFSPTHFDKFSPPDFYTKVCIVGVPPDCARKSTRVIMDNWFPVWEEEFQFPLTVPELALLRIIVREKDQGKDDFGGQTCLPVSELRLGFRSVPLYNRKGEKYKSVKLFMRFQFIDQEENAVSVK 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1150 655 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 518 645 IPR035892 -
Lele28g1150 655 SMART C2_3c 518 625 IPR000008 -
Lele28g1150 655 PRINTS Phospholipase C signature 279 296 IPR001192 GO:0035556
Lele28g1150 655 PRINTS Phospholipase C signature 611 621 IPR001192 GO:0035556
Lele28g1150 655 PRINTS Phospholipase C signature 156 174 IPR001192 GO:0035556
Lele28g1150 655 PRINTS Phospholipase C signature 182 202 IPR001192 GO:0035556
Lele28g1150 655 PRINTS Phospholipase C signature 436 457 IPR001192 GO:0035556
Lele28g1150 655 PRINTS Phospholipase C signature 457 475 IPR001192 GO:0035556
Lele28g1150 655 SMART plcx_3 151 295 IPR000909 -
Lele28g1150 655 SMART plcy_3 382 498 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele28g1150 655 FunFam Phosphoinositide phospholipase C 513 645 - -
Lele28g1150 655 Gene3D C2 domain 513 654 IPR035892 -
Lele28g1150 655 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 387 495 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele28g1150 655 SUPERFAMILY PLC-like phosphodiesterases 151 499 IPR017946 GO:0006629|GO:0008081
Lele28g1150 655 Gene3D Phosphatidylinositol (PI) phosphodiesterase 148 509 IPR017946 GO:0006629|GO:0008081
Lele28g1150 655 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 43 644 IPR001192 GO:0035556
Lele28g1150 655 ProSiteProfiles C2 domain profile. 502 627 IPR000008 -
Lele28g1150 655 MobiDBLite consensus disorder prediction 309 376 - -
Lele28g1150 655 Pfam C2 domain 518 618 IPR000008 -
Lele28g1150 655 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 151 295 - -
Lele28g1150 655 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 411 497 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Lele28g1150 655 Gene3D - 52 143 - -
Lele28g1150 655 Pfam Phosphatidylinositol-specific phospholipase C, X domain 153 295 IPR000909 -
Lele28g1150 655 CDD C2_PLC_like 516 644 - -
Lele28g1150 655 MobiDBLite consensus disorder prediction 339 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1150 Lele-ChrLele28 7482135 7485334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1150 35 644 Acyl Lipid Metabolism Gene Families AT2G40116 55.468 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0921 27 17141992 17145253 Lele28g1150 28 7482135 7485334 CCT
Lele25g1158 25 7504698 7516712 Lele28g1150 28 7482135 7485334 CCT
Lele28g1150 28 7482135 7485334 Lele27g0923 27 17162913 17167247 CCT
Lele28g1150 28 7482135 7485334 Lele25g1174 25 7663490 7666752 CCT
Lele28g1150 28 7482135 7485334 Lele26g1175 26 7632645 7636402 CCT
Lele28g1150 28 7482135 7485334 Lele27g0906 27 17017612 17020825 CCT
Lele28g1150 28 7482135 7485334 Lele28g1168 28 7618012 7621760 CCT
Lele27g0922 27 17148637 17153282 Lele28g1150 28 7482135 7485334 ECH
Lele28g1150 28 7482135 7485334 Lele28g1150 28 7482135 7485334 ECH
Lele25g1158 25 7504698 7516712 Lele28g1150 28 7482135 7485334 hybridization
Lele26g1157 26 7490783 7494089 Lele28g1150 28 7482135 7485334 hybridization