LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g1147	ATGGCCGTCTCCGATGTCGACGCCGTCATCGAGTTCCTTAGGAAGAATGGATTCTCCGAGGCTGAGTCTGCCCTCAAACAGGACATCATCGAGAACCGTGATCTGGGATCCTTTGATTACGAGAAATTCTTCTTCCCCATGGTGCCTCCGCCGCCGCCGGTCAGGGTCCGATCGTCTTGCCGGCCGTCCCCCACTGACTGCTCCTCCGAAGATGAGTTCGTGAGCTTGAGTTCTTCTACTTCTAATGTTTGTTCTTCTGAATTCATCAATCCGTATGGAATCCGTTCTTCATCTCAGAATGATTCTGAATCTTCATCTGATAGACAATCTCAATTTGGAACGGCACGAGATCACCCTCAATTCGATATACAAAACGAAAACGAATCGTATTGGCACAACGAGAAAGACGATGACCATTTCATGACTCCAAACTTTGAAGGGCCAGATTTTTTTAGCTCTCCAACTGAGGACAAGTTCATAACAACATCAGAAATGGACAATGATCAGTACGAGAATCCTCTAAATTTTAGTTACATCTCTGAAGGATTTCAATCGCAAGATAATGGTGATTGTATAGACAAAACATGCCTTCCCAATAACTCATTTGAAGGGGACGAGAAAGATCAGCTCAAAGAAGCGTTATTGGAAAAGGAAATTCATCCGAATGATTCTTCTCACACGAAGGTTTTTGCTGGGAAATTTTCTGGCTATGATTCTTCTGCCTTGGCAAATAATATGGACCAAACGTTTGACTTTTACGCAAGCAATGATATTAGTAAAGGGAATAAAGATTCCTATGACTTGACAATTGAAGTTGCTGAAATAAACAGCTTGGAGGAAGCTCAAGATGATAGAGGATTAATAACTGAAGAATTTCATGAATCAGATGATGCTGCAGATATCACTGATGATGAACTTGTAAAGTACATTCCTGATGATGACTATGAAGTATTTGACTTAAGAATTATTCACAGAAAAAACAGGACTGGATTTGAAGAAAGCAAGGATCTTCCGATTGTTATAAATACAGTTATAGCTGGCAGATACTGTATAACAGCTTATCTCGGTTCGGCAGCCTTCAGTAATGTTGTTCAGGCTCATGATCTTCACACAGGAGTGGATGTTTGCTTGAAGATCATAAAAAATGACAAAGACTTCTTTGATCAAAGCTTAGATGAGATAAAACTTCTTAAACTTGTCAATAAGCATGACCCGGGTGATCGATTCCATATACTGCGTCTTTATGACTACTTCTATAATCAGGAACATCTATTCATTGTTACCGAGCTTCTGCGAGCAAACTTGTACGAATTTCTGAAATTCAACCAAGAATCTGGGGACGAAGCATATTTTACAATGAGCAGGTTGCAGCACATTACTCATCAATGTTTGGAGGCATTGCAATATTTGCATAGCTTAGGAATCATTCACTGTGACCTGAAACCCGAAAACATTCTGATAAAAAATTACAAAAGATGTGAGATCAAGGTCATTGATCTGGGAAGTAGTTGCTTTCTAACAGACAACTTGTGTCTATACGTGCAATCACGATCCTACCGGGCTCCTGAAGTGATACTAGGCCTCCAATATGATGAAAAGATCGATATATGGTCCCTCGGCTGCATCTTAGCAGAGCTATGCTCCGGCGAAGTGCTCTTTCCAAACGACGCAATCGTCATGATTCTTGCACGTATGATTGGAATGCTTGGTCCTATTGATCTTGAAATGTTGGTCAAAGGACAGGAGACTCCAAAGTACTTCACCAAGGAATTTGATATTTATTATATCAACGAGGAGACAGGTCAAGTTGAGTGTATAATTCCAGAGGAGTCATCATTGGAGCAGCATCTGCAGGTTACAGATACTATGTTCATGGACTTTGTAAGATACTTGCTTAGCATAAACCCAAAAACAAGACCTACTGCAACACAGGCTTTGAGACATCCATGGCTTTCTCATGTTTACATGTCAAAGGACAAGAATGTTGGTTGA	1992	0.4071	MAVSDVDAVIEFLRKNGFSEAESALKQDIIENRDLGSFDYEKFFFPMVPPPPPVRVRSSCRPSPTDCSSEDEFVSLSSSTSNVCSSEFINPYGIRSSSQNDSESSSDRQSQFGTARDHPQFDIQNENESYWHNEKDDDHFMTPNFEGPDFFSSPTEDKFITTSEMDNDQYENPLNFSYISEGFQSQDNGDCIDKTCLPNNSFEGDEKDQLKEALLEKEIHPNDSSHTKVFAGKFSGYDSSALANNMDQTFDFYASNDISKGNKDSYDLTIEVAEINSLEEAQDDRGLITEEFHESDDAADITDDELVKYIPDDDYEVFDLRIIHRKNRTGFEESKDLPIVINTVIAGRYCITAYLGSAAFSNVVQAHDLHTGVDVCLKIIKNDKDFFDQSLDEIKLLKLVNKHDPGDRFHILRLYDYFYNQEHLFIVTELLRANLYEFLKFNQESGDEAYFTMSRLQHITHQCLEALQYLHSLGIIHCDLKPENILIKNYKRCEIKVIDLGSSCFLTDNLCLYVQSRSYRAPEVILGLQYDEKIDIWSLGCILAELCSGEVLFPNDAIVMILARMIGMLGPIDLEMLVKGQETPKYFTKEFDIYYINEETGQVECIIPEESSLEQHLQVTDTMFMDFVRYLLSINPKTRPTATQALRHPWLSHVYMSKDKNVG	663

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g1147	663	FunFam	Serine/threonine-protein kinase ppk15	428	652	-	-
	Lele28g1147	663	MobiDBLite	consensus disorder prediction	94	123	-	-
	Lele28g1147	663	SMART	serkin_6	349	651	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele28g1147	663	ProSiteProfiles	Protein kinase domain profile.	349	651	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele28g1147	663	SUPERFAMILY	Protein kinase-like (PK-like)	338	657	IPR011009	-
	Lele28g1147	663	Gene3D	Transferase(Phosphotransferase) domain 1	403	651	-	-
	Lele28g1147	663	Pfam	Protein kinase domain	353	651	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele28g1147	663	FunFam	Putative serine/threonine-protein kinase dyrk2	343	430	-	-
	Lele28g1147	663	CDD	PKc_DYRK_like	349	651	-	-
	Lele28g1147	663	Gene3D	Phosphorylase Kinase; domain 1	344	430	-	-
	Lele28g1147	663	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	475	487	IPR008271	GO:0004672\|GO:0006468
	Lele28g1147	663	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	97	652	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g1147	Lele-ChrLele28	7457860	7460872	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g1147	346	646	MAP Kinase Gene Family	AT5G19010	32.087	1.35e-34	137

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Lele28g1147		Pkinase	9.6e-54	CL0016