LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g1141	ATGGCCTCTTCAGCCAGCAACCAACCGCTCATGCCAAACCTCTACGGCGGCGCCACCTCCGCTCCCCCTCCGACGCCCTCCGCTCATTCCAACAACAACATCTTCCCCGCTCCCGACACCGCCGACGCCTTCTCCCGTCTCCTCCTCCACCGCTTACCATCTCCCACTCTCTCCCTCCCCACTCGCCGCTCCTCCACCCCCGCCACCTCCCCTCCCGTCATATCCCTCTCCGCGGATCAAACCCCCGCCGACGACCTCCTCTCTTCCGTTTCCGACCTCGGATTCTTCCAGCTCACCCACCACTCTGTACCTCCAGAACTCGCCAGCTCCGCCGAGTCAGAATCGCTCGCCCTCTTCGATCTTCCTAGAGACCAGAAGGAATCGTTGCTCCCTAAAAACTGGCCTCTTGGTTACGAATGCGACGAGGACGACGATGATGGAGATGAACAAGGCGAGTCGTTCCGCCTGGACGGGTCGTGTTCGACTGAATCGACCGAGTTGTCTCTGGCTTCTCTGCGGGAGTTCACGCGCGCCCTTGAGAAGTTGGGATTAGAGATCGTTGATTTGCTATCGAAAGCCTTGGATTTCGAGATTCCCGTGGGGGACGACCCGACCCGATTTTGTTCCATGATGTGGATCTCGGAGTGCGAGCGGCGGACGAAGCCGGCCCCATCGGGCGGGTTTTACCCGTTCATAGTGGGGCTGCAGTACCAGATCAGGAGCCAGAAGCTGTCGCTGTTGTCGGATTCGGGTTGGGTGTCCGTGTTGCCCCACGTGGACTCAGTCCTGGTCACCATTGGCGACATTGCTCAGGTGTGGAGCAATGGGAAGTTGAAGAAAGTGAGAGGGAGGCCGGTGGGGGAAGAGAATGGTTCGCGAGGCATAAGCATGACGTTGCTGGTGAGTCTTCCGACGGAGAGCAGGGTGGCTCCGATCCTTCGCAAGGCGGCCGATGAAGAAGATAAAGGAAAGGAGGAGGAGGATGGGGGATCAGTGGAAAAGAAAGCAGTGTTTCAGTCTTTTGATTTTGAAGATTATGCATGGAGGGTGTACCATGAACGCCTTCTCTTTAAGGATCCGCTTGATAGGTATCGCATCGCTTAA	1104	0.577	MASSASNQPLMPNLYGGATSAPPPTPSAHSNNNIFPAPDTADAFSRLLLHRLPSPTLSLPTRRSSTPATSPPVISLSADQTPADDLLSSVSDLGFFQLTHHSVPPELASSAESESLALFDLPRDQKESLLPKNWPLGYECDEDDDDGDEQGESFRLDGSCSTESTELSLASLREFTRALEKLGLEIVDLLSKALDFEIPVGDDPTRFCSMMWISECERRTKPAPSGGFYPFIVGLQYQIRSQKLSLLSDSGWVSVLPHVDSVLVTIGDIAQVWSNGKLKKVRGRPVGEENGSRGISMTLLVSLPTESRVAPILRKAADEEDKGKEEEDGGSVEKKAVFQSFDFEDYAWRVYHERLLFKDPLDRYRIA	367

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g1141	367	Gene3D	-	227	360	IPR027443	-
	Lele28g1141	367	MobiDBLite	consensus disorder prediction	55	77	-	-
	Lele28g1141	367	PANTHER	2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN	1	366	-	-
	Lele28g1141	367	SUPERFAMILY	Clavaminate synthase-like	58	353	-	-
	Lele28g1141	367	MobiDBLite	consensus disorder prediction	1	37	-	-
	Lele28g1141	367	MobiDBLite	consensus disorder prediction	57	77	-	-
	Lele28g1141	367	MobiDBLite	consensus disorder prediction	132	157	-	-
	Lele28g1141	367	Pfam	non-haem dioxygenase in morphine synthesis N-terminal	72	140	IPR026992	-
	Lele28g1141	367	Gene3D	-	49	223	IPR027443	-
	Lele28g1141	367	MobiDBLite	consensus disorder prediction	23	37	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g1141	Lele-ChrLele28	7394295	7395718	Wgd

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lele28g1141	28	7394295	7395718	Lele25g1161	25	7535674	7536847	CCT
	Lele28g1141	28	7394295	7395718	Lele28g1152	28	7495557	7495976	CCT
	Lele25g1149	25	7411628	7413032	Lele28g1141	28	7394295	7395718	hybridization
	Lele26g1149	26	7395986	7397407	Lele28g1141	28	7394295	7395718	hybridization