Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1137 ATGGAAAATTTCTACTATTCTAGTTCTTCTGCTGGTTCTGGTTCTAGTAGCTGCTGCTGGTGGCCTTTGCAGGGCACAACAAACAGTAATCATCATCATCATCCTTGTCCTTTTTCAGTGCAGACTCCAGTGTTGCCTCATGATTCATCAGGCTCTCTTCAGTTCTGTGAGTGCCCTCATTCATGGCCTCCAGAAGATAAAGCTTCCGCTGCCTCCAAAAGCCATAGCCAAGCTGAGAAACGCCGTAGGGACAGAATCAATGCTCAGCTTGCCACTCTCAGAAAATTCATCCCCAAGTCTGATAAGATGGACAAGGCAGCATTACTGGGGAGTGTGATAGAGCAAGTGAAGGATCTGAAACGAAAAGCCATGGATATAGGAACATCATTCACAGTTCCTACAGAGATCGACGAAGTATCAATAGACCAAGAAGAAGACGAAGAGAGTTCAATAAGCTCCATCATCGACAGCAACAGCAAAGTGAATTACAAAGTCAAAGGCAACAACAACAAGAAGATAGTGATCAGAGCTTCAGTGTGCTGTGAGGATCGACCAGAACTGTTCTCAGAACTCATCAAAGTTCTAAAAGGGCTGAGGCTGACGACAGTGAAAGCAGACATGGCAAGTGTGGGAGGAAGAATTAAAAGCATATTGGTTCTGTGTTCTAAGGACAGTGACGACGATACTGTTTGTGTCGCCAGTCTGAAACAGTCTCTTAAATCTGCTGTCACTAAAATTGCAGCTTCGTCTTCTTCATCAATGGCTTCTACTTGTCCTGCAAGAAGTAAGAGGCAGAGGTTCTTCTTGCCTTCGCCTTGCCTCCATTAA 828 0.4481 MENFYYSSSSAGSGSSSCCWWPLQGTTNSNHHHHPCPFSVQTPVLPHDSSGSLQFCECPHSWPPEDKASAASKSHSQAEKRRRDRINAQLATLRKFIPKSDKMDKAALLGSVIEQVKDLKRKAMDIGTSFTVPTEIDEVSIDQEEDEESSISSIIDSNSKVNYKVKGNNNKKIVIRASVCCEDRPELFSELIKVLKGLRLTTVKADMASVGGRIKSILVLCSKDSDDDTVCVASLKQSLKSAVTKIAASSSSSMASTCPARSKRQRFFLPSPCLH 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1137 275 Gene3D - 65 126 IPR036638 GO:0046983
Lele28g1137 275 PANTHER TRANSCRIPTION FACTOR BHLH30 61 268 IPR045847 GO:0003700|GO:0006355
Lele28g1137 275 MobiDBLite consensus disorder prediction 64 84 - -
Lele28g1137 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 70 119 IPR011598 GO:0046983
Lele28g1137 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 70 122 IPR036638 GO:0046983
Lele28g1137 275 Pfam Helix-loop-helix DNA-binding domain 73 119 IPR011598 GO:0046983
Lele28g1137 275 SMART finulus 76 125 IPR011598 GO:0046983
Lele28g1137 275 CDD ACT_UUR-ACR-like 178 242 - -
Lele28g1137 275 CDD bHLH_AtAIG1_like 65 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1137 Lele-ChrLele28 7362084 7363140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1137 1 275 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 40.860 1.88e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele28g1137 HLH 7.4e-10 No_clan