Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1136 ATGGCTCTCACCTCAAATCGATTGAAAGGCTCTTGGAGCCCCCAAGAGGATGCCACTCTCATCAAGCTCGTCCAGCGACACGGTCCTCGCAATTGGTCTCTCATCAGCATCCGCATACCGGGTCGCTCCGGCAAGTCTTGCAGGCTCCGATGGTGCAATCAGCTTAGCCCCGGTGTACAACACCGCCCTTTCACTCCCGCCGAAGACGCCCTCATTGTCCAGGCTCACGCTATCCACGGAAACAAGTGGGCCACCATTGCCCGTCTCTTGCCCGGAAGAACCGACAACTCCATTAAGAACCACTGGAACTCCACCCTGCGCCGCCGCCGAGCGGCCGAGATGTCGTGTGCGTCCGGATCATCAGAGTTGGACTCTATTATGGTAATGAAGAAGCGGCGGGAGCCTTGTGATCCCCCGAATGACTCGGACGCGTGGGAGTCGGGGCAGCGATTGAGAAGGCAGTGCCTCGGGAGGATTTCGCCGGAAAGCAATAGCTACAAGGGTCCAATGGTGGGCCTTGTGACGACGTCGTTGAGTTTGTTACCTCCAGGAGAGAGAATGGATCACAAAGTGAGGAAGAGGAGGAGGAAGAAAAAGGGGAAGGGAATGAGAATGGGAAGGGAAAAGAAGAGGAAGAAGAGACGGGCCTAA 651 0.5653 MALTSNRLKGSWSPQEDATLIKLVQRHGPRNWSLISIRIPGRSGKSCRLRWCNQLSPGVQHRPFTPAEDALIVQAHAIHGNKWATIARLLPGRTDNSIKNHWNSTLRRRRAAEMSCASGSSELDSIMVMKKRREPCDPPNDSDAWESGQRLRRQCLGRISPESNSYKGPMVGLVTTSLSLLPPGERMDHKVRKRRRKKKGKGMRMGREKKRKKRRA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1136 216 Gene3D - 63 109 - -
Lele28g1136 216 CDD SANT 11 53 IPR001005 -
Lele28g1136 216 ProSiteProfiles Myb-like domain profile. 4 55 IPR001005 -
Lele28g1136 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 110 IPR017930 -
Lele28g1136 216 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 59 IPR017930 -
Lele28g1136 216 MobiDBLite consensus disorder prediction 189 216 - -
Lele28g1136 216 MobiDBLite consensus disorder prediction 177 216 - -
Lele28g1136 216 CDD SANT 63 106 IPR001005 -
Lele28g1136 216 Gene3D - 8 60 - -
Lele28g1136 216 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Lele28g1136 216 PANTHER MYB PROTEIN-RELATED 9 144 - -
Lele28g1136 216 FunFam MYB transcription factor 9 60 - -
Lele28g1136 216 SMART sant 8 57 IPR001005 -
Lele28g1136 216 SMART sant 60 108 IPR001005 -
Lele28g1136 216 Pfam Myb-like DNA-binding domain 63 105 IPR001005 -
Lele28g1136 216 Pfam Myb-like DNA-binding domain 9 55 IPR001005 -
Lele28g1136 216 SUPERFAMILY Homeodomain-like 6 102 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1136 Lele-ChrLele28 7357412 7358062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1136 7 119 MYB Transcription Factor Family AT4G37260 70.175 1.66e-52 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele28g1136 Myb_DNA-binding 1.2e-16 CL0123