Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1134 ATGGGCGACCCTTCACCCCCTCCGTCTCAGTCCCCTGAGGCCGCCGCTCGTACGCCCACTCATCCTTCTTCTCGCAAAACCAAAGGCAAAGGTGGTCCCGACAACAAGAAGTTTAGGTTTCGCGGAGTCAGGCAGCGAAGCTGGGGCAAATGGGTCGCCGAGATCCGTGAGCCCCGCAAGCGTACCCGCAAGTGGCTCGGCACTTTCGCCACCGCCGAAGACGCCGCCCGTGCCTACGACCGCGCCGCCCTCATCCTCTGCGGTTCCCGCGCTCAGCTCAACCTCCAGCCTTCTCTCTCTTCCTCTTCCTCCTCCTCCTCCTCTTCTTGTCCTTCCAATTCTTCCTCCGGTCAAACACTCCGCCCCTTGCTCCCCCGGCCCCCAGCCTTCTTTCCCTGCGGCCTTTATAATACTCAGTTTCTCTGCCCAGTCAACAGCTCACTACAAGTGCAACATCATTCACAGAAAGTGGTGCAATTATATGGGTCCCTGAAATCTGGTATTGGGAATAATACTAATCTCGATGACTCCACTACAGAGGGAACCTCGTACCCGAACCATAGCCATGATCTGCATGCGTCAAATCAGGAGCAGCATAGTCATATTATTTGTCATAGTCAGAATGATTGCATGTACGATGATATTAGCTCCTTGGTAGGATCAGGCTTGATGAGTTCTTCTCAGACTATTATAACGCCACAGCGGGGGGCCGCTCTGGATATGCCGGTGGCGGCGGAAGCAGTCAGCGTGGGATCGCCGTCTATGTGGCCGATGACAAATGAGGAAGAGTTACCGTCTTGCCTTTGGGACTATAATGATCCTTTCTTCTTTGAATCTTGA 840 0.5429 MGDPSPPPSQSPEAAARTPTHPSSRKTKGKGGPDNKKFRFRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAALILCGSRAQLNLQPSLSSSSSSSSSSCPSNSSSGQTLRPLLPRPPAFFPCGLYNTQFLCPVNSSLQVQHHSQKVVQLYGSLKSGIGNNTNLDDSTTEGTSYPNHSHDLHASNQEQHSHIICHSQNDCMYDDISSLVGSGLMSSSQTIITPQRGAALDMPVAAEAVSVGSPSMWPMTNEEELPSCLWDYNDPFFFES 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1134 279 MobiDBLite consensus disorder prediction 1 40 - -
Lele28g1134 279 Gene3D AP2/ERF domain 38 96 IPR036955 GO:0003700|GO:0006355
Lele28g1134 279 Pfam AP2 domain 39 87 IPR001471 GO:0003700|GO:0006355
Lele28g1134 279 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Lele28g1134 279 MobiDBLite consensus disorder prediction 169 191 - -
Lele28g1134 279 MobiDBLite consensus disorder prediction 96 121 - -
Lele28g1134 279 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Lele28g1134 279 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Lele28g1134 279 FunFam Ethylene-responsive transcription factor 2 39 97 - -
Lele28g1134 279 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Lele28g1134 279 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Lele28g1134 279 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 18 209 - -
Lele28g1134 279 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1134 Lele-ChrLele28 7339053 7339892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1134 23 278 AP2-EREBP Transcription Factor Family AT2G40220 45.695 5.01e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele28g1134 AP2 4.9e-13 CL0081