Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1131 ATGATAAGCATGAAGGGCTATGAGCCCCGTTCCAGTTCCTCCTGCGCCGCCTGCAAGCTCCTCAAGCGCCGCTGCACCCCCAACTGCATCTTCGCCCCCTACTTCCGCTCCGACGAGTGCAAGAAATTTGCCAAAGTCCACAAGGTCTTCGGCGCCAGCAATGTCAGCAAGATCCTCTTCGAGGTCCCCGAGGAGCAGCGCGAGGACACCGTTAACTCCCTCGCCTACGAGGCAGACGCCCGCCTCAAAGACCCCGTTTATGGATGCATTGGCGCCATCGCTCTCTTGCAGACCAAGATGGTCGAGCTCCAGCACGACCTCGCCATCGCCAGGGCACGTCTCGCTCGTTATTCCTCCGCTTCCGCTTCTTCCTCTGCCGCCGACGCCTTCATTAACAACTTCCCTTCTTCCGTCGACTACGATACCTTCCCTCCTGCTAACGTGGGCCTGCCCCCTTTCCCTGACTCCTCTTCCTCTTGCTGCGATGTGGACGATGGGTTATCGTCGTCCCAGGTTCAGTTATCGAGCCGACACGATATGGTGGACGATTTTTTCCAAACCCCATGGCCATATATATTTTGA 582 0.5739 MISMKGYEPRSSSSCAACKLLKRRCTPNCIFAPYFRSDECKKFAKVHKVFGASNVSKILFEVPEEQREDTVNSLAYEADARLKDPVYGCIGAIALLQTKMVELQHDLAIARARLARYSSASASSSAADAFINNFPSSVDYDTFPPANVGLPPFPDSSSSCCDVDDGLSSSQVQLSSRHDMVDDFFQTPWPYIF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1131 193 Pfam Lateral organ boundaries (LOB) domain 14 111 IPR004883 -
Lele28g1131 193 Coils Coil 93 113 - -
Lele28g1131 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 134 - -
Lele28g1131 193 ProSiteProfiles LOB domain profile. 13 114 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1131 Lele-ChrLele28 7321118 7321699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1131 4 153 AS2 family AT3G11090 63.030 1.22e-66 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele28g1131 LOB 1.3e-37 No_clan