Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1123 ATGGGAGGCAATTCTCCTTGTGCTTCATGCAAATTACTACGACGCCGTTGTGCCAAAGATTGCATCTTTGCTCCTTATTTCTCCTCCGATGACCCTCAAAAATTCGCCATCGTTCATAAGGTCTTCGGCGCTAGCAACGTCGGCAAAATGTTGCAGGAGCTTCCAGTTCATCAGAGAGCAGACGCAGTGAGCAGCTTAGTGTATGAAGCGAATGCAAGAGTTCGAGACCCAGTTTATGGTTGTGTTGGGGCCATATCGTTTCTGCAGAATCAAGTTTCAGAGCTTCAAATGCAGCTCGCAGTGGCTCAAGCAGAGATCCTCTGCAACCAGATGCAGCCGGAGCCGGAGCCGGAGCCATTAGTGGTGCAAAACCCGGAATTTGACCCGAATAATCAGAAACCTTATTTTCTCCAAAACGACCAGTACCTTAGCTTTGCGTCTTCCAGCAATAATGTAATTCATGACTCTCTTCAGAGAGAGAGCTTCTTCGGACACGACATGGTTTCTTGA 510 0.4784 MGGNSPCASCKLLRRRCAKDCIFAPYFSSDDPQKFAIVHKVFGASNVGKMLQELPVHQRADAVSSLVYEANARVRDPVYGCVGAISFLQNQVSELQMQLAVAQAEILCNQMQPEPEPEPLVVQNPEFDPNNQKPYFLQNDQYLSFASSSNNVIHDSLQRESFFGHDMVS 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1123 169 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Lele28g1123 169 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Lele28g1123 169 Coils Coil 85 105 - -
Lele28g1123 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1123 Lele-ChrLele28 7275831 7276447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1123 3 115 AS2 family AT2G30130 90.265 2.53e-71 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele28g1123 LOB 1.1e-41 No_clan