Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1113 ATGGAGAAGATAAATGCAGCAGATTGGCACTATATTTTGGAGAAGAAGAGAGAGAAATGGAAGTTTCAATGGTTACCCTGGATCCTTTGTTTGTGGATTCTTGTACAGAAGCCAGTTTTGGGTGAAGGAGATCGTTGGGATGGAGTGGTTGTCACTGAATCAAATTTCTTGGCACTTCAAGCGTTCAAGCAAGAGCTGATTGATCCCAAAGGCTTCTTGAGAAGCTGGAATGACAGTGGTTTCACTACTTGTTCTGGAGGTTGGGCTGGAATCAAGTGTGCTCAGGGTCACGTTATCGTGATCCAGCTTCCATGGAAGGGACTGAAAGGTCACATCACAGAGAGGATAGGTCAACTTGAAGGACTCCGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGTTCAATCCCTTCTTCATTGGGACTCCTTCCTAATCTCAGAGGGGTTCAGCTATACAACAATCGTCTAGAAGGTTCCATTTCTCCTTCATTAGGTTCTTGCCTTTTGCTTCAGTCCTTAGACCTAAGTAATAACTTACTCTCAGGGAGAATCCCTGATAACTTATTCAATTCTTCTAAGCTTTATTGGCTTAATCTGAGCTTCAATTCCTTCTCTGGTTCAATACCAGCTTCCCTCACTCGCTCACCTTCTCTCACCTTCGTTTCTCTTCAACACAATAATCTCTCTGGCTCTATCCCAAACTCATGGGGTGGGACTTTTTCTAGACTTCAAACGTTAGATTTTTCAAATAATGCCCTGAACGGAAGTTTGCCTGCTAGTCTCTCTAATTTGTCCTCGCTTACTGTGTTGAATGTTGAGAACAACCAGCTTGAGGACCAAATCCCAGAATCTCTTGGTAGACTACGTAATCTTTCTGTTCTTAGTTTGAGGGGAAATCAACTTAGTGGTCACATTCCTGAAAGTGTTGGCAACGTTTCCTCGCTTAAACAGCTTGATTTGTCACTGAATAATCTCAGTGGTGAAATCCCATCTTCCTTTGACAATTTACGTAGCCTTGATTTCTTCAATGTTTCTTACAATAACCTATCTGGCCCTGTTCCCTCTCTACTTGCCCAAAAATTTAACTCAAGCTCGTTTTTGGGTAATGTTCAACTATGTGGGTACGATCCTTCAATCCCATGTCCTTCTCCAGCACCATCCGAGGTTGTCTCTGCTCCATCCTCTAGAACATCAAAACACCATCATCGTCGGAAACTACATACCAAAGACATAATTCTCATAGCAGCAGGGGCTCTCCTCGTACTCCTCGTAATAATATGTTGCATCCTGGTCTTCTTCTTGATCAGAAGAAGAGCAGCATCAAAAGCAGAGAACAAGGCAAGTGCTGGCACTTCCGGAACTGAAAAAGGGGTCGCTTCAGCAGCAGCAGCCGCAGCTGCCGGAGCAGCTGAGGCCGCCGGCGACGAGGCAGGTGGGAAACTAGTCCATTTTGAAGGCCCCACAACCTTTACAGCCGATGATCTTCTGTGTGCAACCGCAGAGATAATGGGAAAGAGCACATACGGAACAGTGTACAAAGCCACATTGGAGGATGGCAGTGAGGTTGCAGTGAAGAGACTGAGAGAAAAGATCACAAAGGGGCAGAGAGAATTTGAATCTGAGGTTAACATTCTCGGGAAAATTCGTCACCCAAATCTTTTGGCAATGAGGGCATATTATCTGGGACCCAAAGGGGAAAAGCTTCTGGTTTTTGATTATATGCCCAGAGGAAGTCTTGCTGCTTTCCTTCACGCTCGTGGGCCAGAAACAGCCATTGATTGGCCAACAAGGATGAGAATAGCACAAGGCATGGCTCGTGGCTTGTTCTACCTTCATTCCCATGAGAACATCATACATGGGAACCTCACATCCAGCAACGTCCTGCTGGACCAAAACATAAATGCTAAAATCGCAGATTTTGGTCTTTCTAGGTTAATGACAACCGCTGCTAGTTCTAACGTGATCGCCGCCGCCGGAGCATTAGGCTACCGAGCGCCGGAGCTCTCTAAGCTAAAGAAAGCAAACACAAAAACTGATGTATACAGCCTGGGCGTGATCTTGTTGGAACTCCTAACAGGGAAATCACCAGGTGAGGCCATGAATGGAGTGGATTTGCCTCAGTGGGTTGCCTCCATTGTGAAAGAAGAATGGACGAATGAGGTATTCGACGTGGAGCTCATGAGAGATGCATCTACCATTGGTGATGAATTGTTGAACACATTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCAAGACCAGAAGCTCAGCAAGTACTACACCAATTAGAAGAGATTAGACCAGAGAGATCAGCCAGTACTGGGGATGATGGAGCCGTTGTTGTTGAAGGAAATTAG 2364 0.453 MEKINAADWHYILEKKREKWKFQWLPWILCLWILVQKPVLGEGDRWDGVVVTESNFLALQAFKQELIDPKGFLRSWNDSGFTTCSGGWAGIKCAQGHVIVIQLPWKGLKGHITERIGQLEGLRKLSLHDNQIGGSIPSSLGLLPNLRGVQLYNNRLEGSISPSLGSCLLLQSLDLSNNLLSGRIPDNLFNSSKLYWLNLSFNSFSGSIPASLTRSPSLTFVSLQHNNLSGSIPNSWGGTFSRLQTLDFSNNALNGSLPASLSNLSSLTVLNVENNQLEDQIPESLGRLRNLSVLSLRGNQLSGHIPESVGNVSSLKQLDLSLNNLSGEIPSSFDNLRSLDFFNVSYNNLSGPVPSLLAQKFNSSSFLGNVQLCGYDPSIPCPSPAPSEVVSAPSSRTSKHHHRRKLHTKDIILIAAGALLVLLVIICCILVFFLIRRRAASKAENKASAGTSGTEKGVASAAAAAAAGAAEAAGDEAGGKLVHFEGPTTFTADDLLCATAEIMGKSTYGTVYKATLEDGSEVAVKRLREKITKGQREFESEVNILGKIRHPNLLAMRAYYLGPKGEKLLVFDYMPRGSLAAFLHARGPETAIDWPTRMRIAQGMARGLFYLHSHENIIHGNLTSSNVLLDQNINAKIADFGLSRLMTTAASSNVIAAAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTIGDELLNTLKLALHCVDPSPSARPEAQQVLHQLEEIRPERSASTGDDGAVVVEGN 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1113 787 Gene3D Phosphorylase Kinase; domain 1 503 574 - -
Lele28g1113 787 Pfam Protein tyrosine and serine/threonine kinase 500 765 IPR001245 GO:0004672|GO:0006468
Lele28g1113 787 FunFam Pollen receptor-like kinase 1 574 779 - -
Lele28g1113 787 SUPERFAMILY L domain-like 97 374 - -
Lele28g1113 787 Gene3D Ribonuclease Inhibitor 49 111 IPR032675 -
Lele28g1113 787 Gene3D Ribonuclease Inhibitor 112 388 IPR032675 -
Lele28g1113 787 Pfam Leucine rich repeat N-terminal domain 57 93 IPR013210 -
Lele28g1113 787 Gene3D Transferase(Phosphotransferase) domain 1 575 782 - -
Lele28g1113 787 MobiDBLite consensus disorder prediction 766 787 - -
Lele28g1113 787 CDD STKc_IRAK 503 768 - -
Lele28g1113 787 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 180 768 - -
Lele28g1113 787 SMART LRR_typ_2 312 335 IPR003591 -
Lele28g1113 787 SMART LRR_typ_2 264 288 IPR003591 -
Lele28g1113 787 SMART LRR_typ_2 240 263 IPR003591 -
Lele28g1113 787 SMART LRR_typ_2 170 191 IPR003591 -
Lele28g1113 787 SMART LRR_typ_2 143 167 IPR003591 -
Lele28g1113 787 SMART LRR_typ_2 119 142 IPR003591 -
Lele28g1113 787 ProSiteProfiles Protein kinase domain profile. 497 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1113 787 SUPERFAMILY Protein kinase-like (PK-like) 501 769 IPR011009 -
Lele28g1113 787 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 92 385 - -
Lele28g1113 787 Pfam Leucine rich repeat 289 349 IPR001611 GO:0005515
Lele28g1113 787 Pfam Leucine rich repeat 231 277 IPR001611 GO:0005515
Lele28g1113 787 FunFam Leucine-rich repeat receptor-like protein kinase 484 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1113 Lele-ChrLele28 7211250 7213696 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1113 46 770 Receptor kinase-like Gene Family AT3G51740 61.806 0.0 904
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele28g1113 PK_Tyr_Ser-Thr 5.3e-43 CL0016