Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1103 ATGTTATGGACCAGAGGAGGCCAAGACGATTCTCCTCGCTCCTTCTCTTTCAGTTCATACATTCGCCGTCGGGGATGTGTTGTCTGGCAATTCATCTGGAGGCGAGGTTCACTTGGGGATTCTGCAACAATGGTTAGGAATTCACTGGTGGACTTCACGGGAATTTGCTCTGCTCGTGATACTCTTCGTCATGCTTCCATTGGTTCTGTATTGCCGTGTGGGTTCAGTTCTGCAATATCAACTCTTCTAGCAGTAGCATTCGTGGGCACATGTTCTGGCATGGCAATCACTGCTCTGGTCGCCGGAAAAACACATCCTCCGAGATTGCTCCCTGAATTCAACCACCACACCTCCTTTTTTGATCTATTCACAGCTGTTCCAGTCATAGTCACTGCCTTCACATTTCATTCCAACGTGCATCCAATTGGGTTTGAACTTGCGAAGCCATCTGATATGACAGTAGCAGTTCAAATAGCACTGGTTCTATGTGGTGCCATATACTTTGCGATAGGCCTATTTGGGTATCTTCTGTTTGGGGATTCAACACAATCAGATATACTCATAAACTTTGATCAGAACACTGCTGGTTCTGCAACTGGCTCCTTGCTCAACACTCTGGTCAGTTTAAGCTATGCTTTCCACATCATGTTGGCGTTTCCTCTCTCGAACTTCACTCTGAGAGCCAACATCGACGAGCTTCTCTTCCACAAGAACCCTCTTGTTGCCACAGACAAGAAAAGATTTATGATCCTCACCCTGGTGCTCCTCGTCTCCAGCTACCTCTTCGCAATAGCTCTCCCTGATATTTGGTACTTCTTTCAGTTCGTGGGATCAACTTCTGCAGTGTGCCTGGCCTTCATATTTCCTGGTTCTCTTGCTCTCAGGGATGCTCAAGGTATATCGAAAAGAAGAGACAAGATCAAAGCACTGATAATGATCATCCTGGCCGCAGTAACAAGTGCGATTGCAATTTCTACCAACATATACAACTTTTTCGTTAGCAAATCATAG 1011 0.459 MLWTRGGQDDSPRSFSFSSYIRRRGCVVWQFIWRRGSLGDSATMVRNSLVDFTGICSARDTLRHASIGSVLPCGFSSAISTLLAVAFVGTCSGMAITALVAGKTHPPRLLPEFNHHTSFFDLFTAVPVIVTAFTFHSNVHPIGFELAKPSDMTVAVQIALVLCGAIYFAIGLFGYLLFGDSTQSDILINFDQNTAGSATGSLLNTLVSLSYAFHIMLAFPLSNFTLRANIDELLFHKNPLVATDKKRFMILTLVLLVSSYLFAIALPDIWYFFQFVGSTSAVCLAFIFPGSLALRDAQGISKRRDKIKALIMIILAAVTSAIAISTNIYNFFVSKS 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1103 336 PANTHER AMINO ACID TRANSPORTER 74 319 - -
Lele28g1103 336 Pfam Transmembrane amino acid transporter protein 76 324 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1103 Lele-ChrLele28 7152155 7154892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1103 76 330 Amino Acid or Auxin Permease AAAP Family AT3G56200 61.176 1.44e-98 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1111 26 7177548 7181745 Lele28g1103 28 7152155 7154892 CCT
Lele27g0967 27 17474937 17479237 Lele28g1103 28 7152155 7154892 CCT
Lele28g1104 28 7157705 7161928 Lele28g1103 28 7152155 7154892 CCT
Lele25g1110 25 7174472 7177626 Lele28g1103 28 7152155 7154892 CCT
Lele28g1103 28 7152155 7154892 Lele28g1103 28 7152155 7154892 ECH
Lele25g1110 25 7174472 7177626 Lele28g1103 28 7152155 7154892 hybridization
Lele26g1110 26 7171291 7173673 Lele28g1103 28 7152155 7154892 hybridization