Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1095 ATGTCCAGAGAAAGGGAAAATTTTGAAGAGATAGGGAAGAAGATCAAGAGGGAGGGAGATGTTTCCTCACAAATGGGAAGAAGACACATGTTGGGTCCTCCAGGAACCCTAAATACCATAACCCCTTGTGCAGCTTGTAAGCTCTTGAGGAGAAGATGTGCTCAGGAATGTCCCTTTTCTCCTTACTTTTCCCCTCACGAGCCCCAAAAATTTGCTTCTGTTCACAAGGTCTTCGGTGCCAGCAACGTCTCCAAGATGCTCATGGAGGTACCAGAGAGTCAAAGAGCAGATGCAGCAAATAGTCTAGTGTATGAAGCAAATGTAAGGCTAAGAGATCCAGTTTACGGATGCATGGGTGCAATTTCTGCTTTGCAGCAACAAGTTCAATCTTTACAAGCTGAACTTAATGCAGTAAGGGCTGAAATACTTAAACACAAACTTAGGGAAGCTACTAACATCATACCCTCCTCTCACCATCATCATCATATTCCTGCTGTCCTCCCTAATTCCTCTCGGCCCGGCCTGTCGATCGCCGCTCCATTGCCACCGCCACTGCCCCCTCCTCCACCACCGCCTTGTTCTCTTCCTTCTACTTCTGATTCCTCTTCTTCCATGTATACCCAAATCCAGCATAGGCCTCCTCCCACCAATTATAACACAATTTCAAGTGATAATATTTCCTATTTTGGTTAA 693 0.4574 MSRERENFEEIGKKIKREGDVSSQMGRRHMLGPPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVRAEILKHKLREATNIIPSSHHHHHIPAVLPNSSRPGLSIAAPLPPPLPPPPPPPCSLPSTSDSSSSMYTQIQHRPPPTNYNTISSDNISYFG 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1095 230 MobiDBLite consensus disorder prediction 1 24 - -
Lele28g1095 230 MobiDBLite consensus disorder prediction 177 196 - -
Lele28g1095 230 ProSiteProfiles LOB domain profile. 41 142 IPR004883 -
Lele28g1095 230 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 186 - -
Lele28g1095 230 Pfam Lateral organ boundaries (LOB) domain 42 139 IPR004883 -
Lele28g1095 230 PRINTS Wilm's tumour protein signature 178 192 - -
Lele28g1095 230 PRINTS Wilm's tumour protein signature 124 140 - -
Lele28g1095 230 MobiDBLite consensus disorder prediction 1 34 - -
Lele28g1095 230 Coils Coil 121 148 - -
Lele28g1095 230 MobiDBLite consensus disorder prediction 174 230 - -
Lele28g1095 230 MobiDBLite consensus disorder prediction 197 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1095 Lele-ChrLele28 7116623 7117719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1095 1 153 AS2 family AT2G30340 69.939 2.24e-75 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele28g1095 LOB 5.7e-41 No_clan