Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1089 ATGAAGAAAGGGTCATTTCTGAGAATCTTTGTAACTAATAGACACAAGTCACAAAATTGTGTCTTAGGTTTTGTGGTACCTGCAATGGAGAAAAGGGGAAATGTTCTGATGCACAAGTACGAGTTTGGAAGGTTATTAGGTCAAGGAAATTTTGCAAAGGTTTACCATGCAAAAGACCTTAGAACTGGTGAAAATGTTGCCATTAAGATGATTGATAAGGAGAGGATTCTGAAAGCTGGGCTAGTTGATCAAACAAAGCGAGAAATTTCGGTCATGGGACTGATTAAACATCCAAATGTACTGAAGATTTATGAGGTATTGGCCACCAAAACCAAGATTTACTTCATCATGGAATATGCCAAAGGGGGTGAACTCTTCAGGAAGCTAACTAAAGGCAGACTCCATGAAAACTTGGCAAGGCAGTATTTTCAACAATTGATCAGCGCGATAGATTGTTGCCACAGAAATGGGGTTTATCATAGGGATTTGAAGCCAGAGAATTTACTTTTGGATGAGAATGGAAATCTCAAGGTTGCAGATTTTGGATTGAGTGCCCTTGTTGAATCTCATCGCCAAGGAAGCTTACTGCACACAACTTGTGGAACTCCTGCATATGTAGCTCCTGAAGTTATAAGCCAAAAAGGCTATGATGGAGCAAAAGCTGACATATGGTCTTGTGGGGTGGTCTTATATGTTCTATTGTCTGGTCGATTGCCATTCCGTGATGTGAATCTTATCGAACTGTACAGGAAAATATGTTCAGGAAAGTACAAATGTCCAATCTGGTTTTCATTTGAAGCACGCAGGCTTTTGTTCAGAATCCTTGACCCTAACCCTGAGACTAGAATTTCCATATCAAAGATTTTGGAAAGTTCCTGGTTCAAAAACGGATTCAGTTCAAAGGCTGATAGAATGAAAACACCAGTTACAGATTTGGAGGATTCAATCAAGGCTGATCGCCTTGATCTATCTGAGAATGAAAGTGGTGATACATCTGAGGCTAATCAAGCATTGGTGCAACCTACTAATTTGAATGCTTTTGATATAATTTCTCTATCAGCTGGCTTTGATTTGTCTGGGCTTTTTGCAAGAAACAACGAAAGGAAAGATGTGAAATTTACTTCACTGCACTCTGCATCATCTATCATTTCTGCAATAGAGGACATGGCTCATGTTCTGGAGCTGAAGATAACAAAAATAGATGGAGGGTTGCTGAAGTTGGAGAGATCTAGTAAAGGAAGAATGGTGCCTTTATCCATTGATGCTGAAATATTTGAGTTCACACCATCTTTCCATTTGATTGAGATGAAGAAGTCTAGTGGTAATACATTTGAATACCAAAAGATGTTGGAGGAGGAGATCAAACCAGCTCTCAGAGACATTGTGTCGGCTTGGCAAGATGAACAGCAACAGCAGTAG 1419 0.3968 MKKGSFLRIFVTNRHKSQNCVLGFVVPAMEKRGNVLMHKYEFGRLLGQGNFAKVYHAKDLRTGENVAIKMIDKERILKAGLVDQTKREISVMGLIKHPNVLKIYEVLATKTKIYFIMEYAKGGELFRKLTKGRLHENLARQYFQQLISAIDCCHRNGVYHRDLKPENLLLDENGNLKVADFGLSALVESHRQGSLLHTTCGTPAYVAPEVISQKGYDGAKADIWSCGVVLYVLLSGRLPFRDVNLIELYRKICSGKYKCPIWFSFEARRLLFRILDPNPETRISISKILESSWFKNGFSSKADRMKTPVTDLEDSIKADRLDLSENESGDTSEANQALVQPTNLNAFDIISLSAGFDLSGLFARNNERKDVKFTSLHSASSIISAIEDMAHVLELKITKIDGGLLKLERSSKGRMVPLSIDAEIFEFTPSFHLIEMKKSSGNTFEYQKMLEEEIKPALRDIVSAWQDEQQQQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1089 472 FunFam Non-specific serine/threonine protein kinase 31 119 - -
Lele28g1089 472 CDD CIPK_C 345 459 - -
Lele28g1089 472 Gene3D Transferase(Phosphotransferase) domain 1 122 319 - -
Lele28g1089 472 ProSiteProfiles NAF domain profile. 339 363 IPR018451 GO:0007165
Lele28g1089 472 Pfam NAF domain 341 399 IPR004041 GO:0007165
Lele28g1089 472 Pfam Protein kinase domain 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1089 472 SUPERFAMILY Protein kinase-like (PK-like) 33 303 IPR011009 -
Lele28g1089 472 SMART serkin_6 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1089 472 Gene3D Phosphorylase Kinase; domain 1 36 121 - -
Lele28g1089 472 ProSitePatterns Protein kinases ATP-binding region signature. 46 78 IPR017441 GO:0005524
Lele28g1089 472 FunFam Non-specific serine/threonine protein kinase 34 336 - -
Lele28g1089 472 Gene3D Kinase associated domain 1, KA1 339 465 - -
Lele28g1089 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Lele28g1089 472 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 34 456 - -
Lele28g1089 472 ProSiteProfiles Protein kinase domain profile. 40 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1089 472 FunFam Non-specific serine/threonine protein kinase 339 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1089 Lele-ChrLele28 7080226 7081644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1089 29 471 CBL-interacting serine-threonine protein kinases AT5G58380 57.582 0.0 544
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele28g1089 Pkinase 5.7e-72 CL0016