Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1086 ATGGCGAACATTTGCTGTACAACACTCCGTGTTGGGGCAGCTCTGGGCTCTAGATTTCTTGAAAATAATCGGACCTATTCAATTAGAAAATCTAACCCTAGAAATTTTCGGACCCTCTTTGGATTTTCTCTTCGGTCATCATCTCTACCGAAATCGTCATCGACTGTACTCTGTAGAATGGACAATACAGCTAGGGTTTCCACTCTGTCCAGTGGAGGGGACGATTTCGTTCGCTTCCCGTTGTCTCCATCGAATGCTTTGGTCATTCAGAAAGGAGACATCACGAAGTGGTCTATCAACGGTTCTTCCGACGCAATAGTGAATCCAGCGAATGAGAGAATGCTTGGAGGTGGTGGTGCAGATGGAGCCATACACAGAGCTGCTGGGCCAGATCTTTATCAAGCGTGCTTGAACGTTCTAGAAGTCAGACCTGGAATTCGCTGTCCGATAGGAGAAGCTAGGATCACACCAGGTTTTAGGCTGCCTGCTTCTCATGTTATTCATACCGTTGGACCAATCTACAATTCAGATAGTAATCCTGCTGCATCTCTAGCAAGTGCTTACAGGAATAGTTTGAGGGTTGCAAAAGAGAACAATATTCAGTATATAGCATTTCCAGCCATATCCTGTGGCGTCTATGGATATCCTTTCGATGAAGCTGCCACAGTGGCAATATCTACCATCAAAGATTTTCGAGATGACTTGAAGGAGGTCCACTTCGTTCTGTTCTCTCCTGATATCTATCTTGTTTGGATAAACAAAGCGAGCGAGTTGCTGAAAGAGTAA 786 0.4491 MANICCTTLRVGAALGSRFLENNRTYSIRKSNPRNFRTLFGFSLRSSSLPKSSSTVLCRMDNTARVSTLSSGGDDFVRFPLSPSNALVIQKGDITKWSINGSSDAIVNPANERMLGGGGADGAIHRAAGPDLYQACLNVLEVRPGIRCPIGEARITPGFRLPASHVIHTVGPIYNSDSNPAASLASAYRNSLRVAKENNIQYIAFPAISCGVYGYPFDEAATVAISTIKDFRDDLKEVHFVLFSPDIYLVWINKASELLKE 261
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1086 261 CDD Macro_OAADPr_deacetylase 87 256 - -
Lele28g1086 261 Pfam Macro domain 107 224 IPR002589 -
Lele28g1086 261 SUPERFAMILY Macro domain-like 86 254 IPR043472 -
Lele28g1086 261 Gene3D Leucine Aminopeptidase, subunit E, domain 1 46 255 IPR043472 -
Lele28g1086 261 PANTHER GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 70 258 - -
Lele28g1086 261 SMART YBR022w_8 86 224 IPR002589 -
Lele28g1086 261 ProSiteProfiles Macro domain profile. 74 259 IPR002589 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele28g1086 Lele-ChrLele28 7051998 7053936 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1086 92 234 C2H2 Transcription Factor Family AT5G01310 29.936 1.22e-06 47.4