Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1082 ATGGATTTTCTGAACTCATCTCCACATATTATTCTTCATGCAGCACCACCAGAAGCCCTAGCTAGCGACGACCTGCCCGGGAGCTTCAGATCTGTACTGTCACCATGACATTCAAGAGAAGGAACGGCGGACGCAATAAGCACGGGCGTGGACATGTTAAATTCATTCGATGCTCCAACTGTGGTAAATGCTGTCCCAAGGACAAGTCAATCAAGAGAATACACGCTCCCCAAGCTGTATGTTAAGATGCAGTACTGTGTTTCCTGTGCTATTCATTCGCATGTTGTGAGAGTTCGTTCTCGCACTGATAGGAGGAACCGTGAGCCCCCACAGCGCTTCATCAGACGCAGGGATGATGCACCAAGACCTGGTCAACCTGGGCAAGCACCTCGCCCTGTTGGAGCAGCTGCTGCTCGTACTTAA 423 0.5059 MDFLNSSPHIILHAAPPEALASDDLPGSFRSVLSPXHSREGTADAISTGVDMLNSFDAPTVVNAVPRTSQSREYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRNREPPQRFIRRRDDAPRPGQPGQAPRPVGAAAART 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1082 140 MobiDBLite consensus disorder prediction 99 140 - -
Lele28g1082 140 Pfam Ribosomal protein S26e 63 118 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele28g1082 140 PANTHER 40S RIBOSOMAL PROTEIN S26 63 135 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele28g1082 140 ProSitePatterns Ribosomal protein S26e signature. 85 92 IPR000892 GO:0003735|GO:0005840|GO:0006412
Lele28g1082 140 MobiDBLite consensus disorder prediction 101 122 - -
Lele28g1082 140 Gene3D Ribosomal protein S26e 53 126 IPR038551 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1082 Lele-ChrLele28 7029362 7032850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1082 74 128 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 80.000 3.22e-27 96.7