Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1066 ATGCTCATAGATTATCTTCACTGTTTCCCCGTATTCAACTTCTCAGTGCGTATTATTATGTCGTCGGAAGAAATTGGTCTTGCTTCAGATCAGAGGATCGATAACGGTCTTAATTCACCCCCAGTGTTCCAAGACGACCCCTTGCGTTACAGCTGTGGTGCTCCACAACGTCAGGTCGGGGACCCAGGTTCGAAAACGAGGGAGCTTGGCGGTTTCCTTGATGAAAAGATGTTCGCTGTGGACCGTAACCGTTTTTTCACGGCTCAGGGCTTGGAGTTCCGTCGTAATGTTTACGGGGATTGCTCGGACCAGCGGAACCCACCGGACCGCCGGAATTGGAATGGGAACAGGAGCACTGCATCTCCGAGCGGCAATGAATCGGACGGCGAGGATGATGAAGACGATGAGGAAGACGACGACGATGTTGAGGGTGGCGCTGAAGTAGAAAGACTAGTTGGTGTTAACGATGCAACCAAAGGGAATTCTAATCCCAATTCAATTAACGATATTAACAATAACAGCATCAGTGGGGTTAACCTTGCTAGTGCTGCAGATGGAATATCGAACAGAAAAGATCAACATCATTCACCCTACGGATCCAGTAGAGAGGTATTGGGGAAGGATGGAGAAATTGGGCCGGCGCAGAATAATTCAAGGGGTAACGACGAAGATCATCAACAAGAAAGGTTAGATAAATCGCAGAGTGCGGTCACGATTGCCGAAACTGATTGTGAGGAGTATTATTCACACTATCTCCAAGGCACGGAGGGCTCAGCTTCTGTGCAGAAAGCTATAGCAGGGGAAAATGGTTGCGGATTTAGCGGAAGAAAGGATGTTATCTATTCAAGCGAGTCAGTCGACTCGTTGAGGGCAGTGCTTTCAGATCCTATAACGGGAGCTCTTATGGATGATGCAATGATATTGCCTTGTGGACATTCCTTCGGTGGAGGAGGAATACAACATGTTATTAGAATGAAAGCTTGTTGCACTTGTTCCCAACCCGTTTCTGAAGAATCAATATCTCCAAATCTATCACTTAGAGTTGCTGTGCAGGCATACCGTCGGGAAGATGAGTCACAGTTTTACCGATCATCTAAAAGAAGAAGAGAAAGATTTGATCAGGGTGGTTATGGTGATTCAACAGTTATGGAACAACCAAGGGCCAGAGGTGTTCAATTTCCATTTGCTGTGATGGACCGGGTTATTATAAAGGGGAACAAGAGGACCCCACAACGTTTTGTTGGACGGGAAGCCATTGTAACAACACAATGCCTGAATGGATGGTATGTGGTAAAGACATTGGACAATGCAGAGAGTGTTAAATTGCAGTATCGCTCGCTTGCTAAGGTTTCAGATGACCCTTCAAAAGCAGCCTCCAGCAAGGTGGGACCTAATTGGCTTTAA 1404 0.4658 MLIDYLHCFPVFNFSVRIIMSSEEIGLASDQRIDNGLNSPPVFQDDPLRYSCGAPQRQVGDPGSKTRELGGFLDEKMFAVDRNRFFTAQGLEFRRNVYGDCSDQRNPPDRRNWNGNRSTASPSGNESDGEDDEDDEEDDDDVEGGAEVERLVGVNDATKGNSNPNSINDINNNSISGVNLASAADGISNRKDQHHSPYGSSREVLGKDGEIGPAQNNSRGNDEDHQQERLDKSQSAVTIAETDCEEYYSHYLQGTEGSASVQKAIAGENGCGFSGRKDVIYSSESVDSLRAVLSDPITGALMDDAMILPCGHSFGGGGIQHVIRMKACCTCSQPVSEESISPNLSLRVAVQAYRREDESQFYRSSKRRRERFDQGGYGDSTVMEQPRARGVQFPFAVMDRVIIKGNKRTPQRFVGREAIVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVSDDPSKAASSKVGPNWL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1066 467 MobiDBLite consensus disorder prediction 156 172 - -
Lele28g1066 467 MobiDBLite consensus disorder prediction 108 125 - -
Lele28g1066 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 287 358 IPR013083 -
Lele28g1066 467 SUPERFAMILY RING/U-box 284 359 - -
Lele28g1066 467 MobiDBLite consensus disorder prediction 126 145 - -
Lele28g1066 467 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 20 462 - -
Lele28g1066 467 MobiDBLite consensus disorder prediction 187 235 - -
Lele28g1066 467 MobiDBLite consensus disorder prediction 98 172 - -
Lele28g1066 467 ProSiteProfiles U-box domain profile. 288 360 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1066 Lele-ChrLele28 6934704 6937627 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1066 233 467 Plant U-box Gene Family AT5G05230 61.157 6.53e-93 284