LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g1065	ATGGCTGCCACTGCTAGTGTAGGCAGAAAGAAACTCATAGTCACGGCTCTCTGCAAACACCTTTCTTTAAATCCAAATATTATTCCATCTGATGGTTTGGAAAGTGATGTCAAGAGTCTTTACTTAAACATCTCAAAGTCATCAGGACATGGGTTCAATGACAGTAACGAGGTGATGAAGTGGGTAGCATTTGCAGAAACTTTCCCTGAAATCCCTGAAGCCTCTTTTGAAGTTCTCAAGGGTTTAAATGACGAACTCTCTGTGAAGTCTGTGCTATTAGGCAATGGTTTGAAACCGTCTGAAGCTGATATTATAGTTTTTTCTGCTGTTCATTCCTCCCTGTTGAAATCTAACAAAGTTTTAATGGGTGCTTATTGCCAGACCACCCTTTCAGAGACGAACAGAGAAAAACTGCCACATGTCTTGAGATGGATGAATTACATTCAGATAGAAAAACCTATAGCAGCTGCTGAAGCTGATTCAAAAGAATCAAAAGCAAAAAAGAATGAGCAAAGCACTAAGAATGTAAACAAACCAGAAAAAGAAGAAAAGGTAACAGGAGACAAGGATGCTGCTAAAGGTAATACAAAACCTGTTCAAACAGAAGCGCCGGAGAAAGATAAAGAACTTAGTGTCAGTTTGCTAAATATTCAGGTCGGACTAATTCGTAAAGCATGGAAGCATCCAACAGCTGATAGTCTGCTAGTCGAGGAGATAGATGTTGGGGATGCCAAATTGCGGCAAGTTGTCAGTGGATTGGCAAAGTTTTGTAGCCCTGAAGAGTTGACGAACCGTCGTGTTGTACTTATTACAAATGTCAAGCCTGGAAAACTACGAGATGTTATGTCAGAGGGACTGGTCTTATGTGCTTCTAATGAAGATCATACTGTTGTCGAGCCCTTGCTTCCTCCAGAAGGGGCTAAAATTGGAGAGCGTGTTTTATTTTCCGGGATTGATGGGAAGCCAGAAGATGTACTTAACCCAAAGAAGAAACAGCTGGAGAAGATTACACCGAATCTCTTCACTGATGAAAAGGGTGTCGCCACTTTCAAGGGAATACCTTTTATGACGTCAGTCATAATCCAATACTACACAGAAGCTAAGGAGATTGTGATGTGGTTGGATGATATGCTGCACTTGGATTTTATTCTCCAGCTTATGACGCTGTCCTCCCTGCAAATTTTTTTATTCTCTCCAGCTGTGAAGGTCAGCAAAATTGACAGTCTGATTTTGATTTTCTTTAAGCAAAGAACATCTCAGAATGAAGCAGAACACCCCCCCTCCTCCTCTATTTATTATGTGTTTCTAAGATTCAAAAAACGTATGGCTTCTTCTTCCTCTTCCTCTTCCTCATCAAATTGGGCCATGGAAAATGGAGTTATTCCCCATGTTCTAGCTGTTGATGACAATCTCATTGACCGCAAACTCGTTGAGAAGCTCCTCAGAAATTCTTCTTGCAAAGTGACAACTGCGGAAAATGGACCGAGGGCATTGGAGCTTCTGGGGTTGGCAAGTGATGAAGAAAACACCATGAAGGGCACAGGATCCAAAGTGAATATGATTATCACAGACTATTGTATGCCAGGGATGACAGGATATGAACTACTCAAGAAAATAAAGAAATCATCAATCATGAAGGAGGTTCCAGTGGTGATCATGTCATCTGAGAACATCCCAACTAGGGTGAACAAGTGTTTGGAAGAAGGTGCTCAGATGTTCATACAAAAACCCCTCAAACAATCCGATGTAAAGAAGCTGACATGTCAACTGATGAATTGCAGAGGCTAG	1788	0.4128	MAATASVGRKKLIVTALCKHLSLNPNIIPSDGLESDVKSLYLNISKSSGHGFNDSNEVMKWVAFAETFPEIPEASFEVLKGLNDELSVKSVLLGNGLKPSEADIIVFSAVHSSLLKSNKVLMGAYCQTTLSETNREKLPHVLRWMNYIQIEKPIAAAEADSKESKAKKNEQSTKNVNKPEKEEKVTGDKDAAKGNTKPVQTEAPEKDKELSVSLLNIQVGLIRKAWKHPTADSLLVEEIDVGDAKLRQVVSGLAKFCSPEELTNRRVVLITNVKPGKLRDVMSEGLVLCASNEDHTVVEPLLPPEGAKIGERVLFSGIDGKPEDVLNPKKKQLEKITPNLFTDEKGVATFKGIPFMTSVIIQYYTEAKEIVMWLDDMLHLDFILQLMTLSSLQIFLFSPAVKVSKIDSLILIFFKQRTSQNEAEHPPSSSIYYVFLRFKKRMASSSSSSSSSNWAMENGVIPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLASDEENTMKGTGSKVNMIITDYCMPGMTGYELLKKIKKSSIMKEVPVVIMSSENIPTRVNKCLEEGAQMFIQKPLKQSDVKKLTCQLMNCRG	595

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g1065	595	MobiDBLite	consensus disorder prediction	158	207	-	-
	Lele28g1065	595	Gene3D	-	211	371	IPR012340	-
	Lele28g1065	595	Pfam	Response regulator receiver domain	464	585	IPR001789	GO:0000160
	Lele28g1065	595	SUPERFAMILY	CheY-like	463	591	IPR011006	-
	Lele28g1065	595	PANTHER	TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER	38	358	-	-
	Lele28g1065	595	SUPERFAMILY	GST C-terminal domain-like	49	149	IPR036282	-
	Lele28g1065	595	Gene3D	-	461	593	-	-
	Lele28g1065	595	ProSiteProfiles	tRNA-binding domain profile.	211	314	IPR002547	GO:0000049
	Lele28g1065	595	SMART	REC_2	462	587	IPR001789	GO:0000160
	Lele28g1065	595	ProSiteProfiles	Response regulatory domain profile.	463	591	IPR001789	GO:0000160

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g1065	Lele-ChrLele28	6908289	6917925	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g1065	447	594	Response Regulator Gene Family	AT3G56380	68.456	3.60e-61	198

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Lele28g1065		Response_reg	4.1e-21	CL0304

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