Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1061 ATGGACGATGGCGTTACTTCTTTGATTAAGAGGGCTTGTGAGTTAGCCAGAAACCTTGAATCGAACCTTCCCAGTGATTCTTCTGATTCGGTGTTGAGTTGTATTGATGAGATCGTGGCGAAACTTAATGCCGCTAAAGGGAGGTTGTTGTTGGTATCGCCTCCGCCGCCTAGTGACGAAGAAGCTGCTAATCAGGAAATCATACAGCAGCAGCCTCCAATGGCGGCTTCAGCAGCTTCTTCATTATTGCAACAATGGCTATCTGTGAGTCATCAGTTTGTCCAAATGCCGCAACTTCAAGCTCCGGTGAGGACTCTGGAGCCGCCCAGAGTAGGTACCCTGCAGATCATGACTGACTTAGATGCTTCTGCGGAAGGTGATGTTGAAGCATCTCCTTCTCGACGCCGTAGAAGGTGCACACACCAGAAATTATATCAATGCCCAGCGAAGAAACAAGTGCAGCGTCAGGATAATAGCCCTAACATATTTGCAGTGACATATAGAGGAAGCCACACGTGCCACATGTCTTCCACAGCTCCATCTTCATCATCAGTTCCTCCACAACTTATCATCTCACAACAGTCACAGGACGTCAGTCACATTAGTGCTACTACTGCTACTTCCTCCCAATTGCCTCCTTCTTCTACTCCCATTTCTGGCTGGTTGCCTTCTGTTGTCCTTCCCGGCGCTGGTTCAGAGGCTGGGGTCGCCGGTCCCTCCACGAGGTTTGGAGCTGATTACCCGGTGGCAGATATGGCTGATGTCATGTTTAATTCAGGTTCTAGCAGTGGTAATCATAGCGTGGAGTCTCTCTTTGCTTCTGCTGATGAGAAATGGGAAGCAGGCGACAACAAGAAAAGCTAG 864 0.4907 MDDGVTSLIKRACELARNLESNLPSDSSDSVLSCIDEIVAKLNAAKGRLLLVSPPPPSDEEAANQEIIQQQPPMAASAASSLLQQWLSVSHQFVQMPQLQAPVRTLEPPRVGTLQIMTDLDASAEGDVEASPSRRRRRCTHQKLYQCPAKKQVQRQDNSPNIFAVTYRGSHTCHMSSTAPSSSSVPPQLIISQQSQDVSHISATTATSSQLPPSSTPISGWLPSVVLPGAGSEAGVAGPSTRFGADYPVADMADVMFNSGSSSGNHSVESLFASADEKWEAGDNKKS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1061 287 SMART WRKY_cls 129 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g1061 287 SUPERFAMILY WRKY DNA-binding domain 134 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g1061 287 Gene3D WRKY domain 125 176 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g1061 287 MobiDBLite consensus disorder prediction 193 216 - -
Lele28g1061 287 MobiDBLite consensus disorder prediction 259 287 - -
Lele28g1061 287 Pfam WRKY DNA -binding domain 138 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g1061 287 ProSiteProfiles WRKY domain profile. 134 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g1061 287 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 133 186 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1061 Lele-ChrLele28 6888363 6890472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1061 134 265 WRKY Transcription Factor Family AT2G40740 41.667 4.34e-20 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele28g1061 WRKY 3.1e-10 CL0274