LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g1060	ATGGCCAATACTGTTTCCCCAGAAAGTAGCTTGCTCTCACCCAAGAACAAGAACATAGATGTGATCGGAGAGCTCCTTCAGGGTTACCGGTCTGCTTCCCAGCTTAAGTTTCTGCTCCAGAAGCCTTTTGATGACTATGGCTCTCTTTCTGCTCATCAACATTTGGCCATCGTTCTTAGATCTTTCACCCACTCTCTTTCTCTTCTCACTTCTTCCTCCTCTGACGACGACGTCGACGCTGCTCAGAATCTGGTGGTTTCCGGTGAGAATGAGCCGCCGCTGCCTGACTACTGCCTTGACCGGAAGTCTCCCGATGAGAGCAAGACAAGGGGGAGATCCGCGCCGGCCACCAAGAGTCGGAGAGGCTGCTACAAAAGAAGGAGGACTGAGCAAACATGGACCGTAGTCTCTTCCTCTGCGGATGATAATCATGCATGGAGAAAGTACGGACAGAAGGAAATCCTAACTTTCAAATTTCCCAGGAGTTACATGAGGTGTACTCGCAAGTGTGAACAAGGTTGTCGGGCATTGAAGCAGGTGCAGCGAATCCAAGAGAAACCTGAACTCTATCAGATTACGTACATCGGAGATCACACATGTAAAGACATCCTCAAGACACCCCAAGTGGTCACAGATTCTGGTAATAATTGGGAATCATTCTTGGCTGCAGATTCAAAGATTCCATCAAACGAAGTAAATAATAAGGTGCATCATCATCCCATAAAACAAGAGCGTCGTCGTCGTCGTCGCCGTCCCGAAGAGGAGACACCGAGTGATGATTTCACCGACAGCAGCTTGGACCCTAGTTTGTGGTCGGATCTGAAAGATCTCTCCGAGGCTGCAATGGTTTCTTTGGGTTGTTCTGATGATAATAATAATGCAGATACTGTGTATTCATGTTCTGGCTCTTTGGATTTCGGGGTTGATGATTCTGTTCATTTCGGCTCCGATGATTTCCACTTCGATGGATGA	972	0.4784	MANTVSPESSLLSPKNKNIDVIGELLQGYRSASQLKFLLQKPFDDYGSLSAHQHLAIVLRSFTHSLSLLTSSSSDDDVDAAQNLVVSGENEPPLPDYCLDRKSPDESKTRGRSAPATKSRRGCYKRRRTEQTWTVVSSSADDNHAWRKYGQKEILTFKFPRSYMRCTRKCEQGCRALKQVQRIQEKPELYQITYIGDHTCKDILKTPQVVTDSGNNWESFLAADSKIPSNEVNNKVHHHPIKQERRRRRRRPEEETPSDDFTDSSLDPSLWSDLKDLSEAAMVSLGCSDDNNNADTVYSCSGSLDFGVDDSVHFGSDDFHFDG	323

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g1060	323	MobiDBLite	consensus disorder prediction	228	267	-	-
	Lele28g1060	323	ProSiteProfiles	WRKY domain profile.	141	198	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele28g1060	323	MobiDBLite	consensus disorder prediction	85	123	-	-
	Lele28g1060	323	Gene3D	WRKY domain	122	202	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele28g1060	323	SUPERFAMILY	WRKY DNA-binding domain	137	201	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele28g1060	323	SMART	WRKY_cls	140	202	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele28g1060	323	PANTHER	WRKY TRANSCRIPTION FACTOR 21-RELATED	27	228	IPR044810	GO:0003700
	Lele28g1060	323	MobiDBLite	consensus disorder prediction	95	113	-	-
	Lele28g1060	323	Pfam	WRKY DNA -binding domain	141	201	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g1060	Lele-ChrLele28	6883457	6885827	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g1060	15	211	WRKY Transcription Factor Family	AT3G56400	40.394	5.14e-41	143

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele28g1060		WRKY	5.8e-21	CL0274