Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1054 ATGGGACTATTCACGAGATCACAATCCCATATATGCCCCGCATATATCCTCACCAACAGAGCTCAGAGCAAAATAAGTGAGAGGTACGCACATACAATATTGGTGAGCGCAGAGAAAGCCATGCCTGCGACTGTGAGAGAGGAAGGGGTCGACATGATGACAGAAACAAGAACGATTCCCTTGAAGCAGCAGCAGCACTTTGTTCTGGTACATGGAATAGGAGGAGGAAGTTGGTGCTGGTACAAAATTCAGTGTCTCATGGAGAATTCTGGCTACAAGGTCTCATGCATAGACCTCAAAAGTGCAGGAATTGATCGATCTGATGCCGATTCTGTTGTTTCCTTTGATGATTACAATCAACCTCTCATGGATTTCATGTCCTCTATGCCTGAGAATGAACAGGTGATATTGGTGGGACATAGCGCTGGAGGGTTGAGTATTACTCAGGCCTGTCACAAGTTTTCAAAGAAGATCAGATTAGCAGTGTATTTAGCAGCAACTATGCTCAAGCTGGGATTCCAGACAGAAGAGGATATGAAAGATGGGATACCTGACTTATCTGAGTTTGGGGATGTGTACGAGCTAGGATTTGGACTGGGAAATGATAAGCCCCCAACCAGTGCTGTGGTGAAGAAAGAGTTCCAACGCAAAATCATATATCATTTGAGCCCACGTGAGGATTCAACCTTAGCTGCGATGCTTTTGAAGCCGGGGCCGGTTCAAGCTCTGACGAGCGCGCGATTTGACGAAGAAGGGGAAGTGGAGAAGGTGAGGCGCGTGTACGTAAGGACGAAGCAGGATAAGGTGGTGAAGGGAGAGCAACAGGAGGCGATGATAAAGAAGTGGCCACCATGTGCAGTGTATGAACTGGACAGCGACCATAGCCCCTTCTTCTCCACGCCATTCGTCCTCTTCGGCTTGCTTGTGAAAGCTGCTGCAGCTTTTGACGTTGGATTCAACTTCCTAAGCCAAAGCTGA 978 0.4765 MGLFTRSQSHICPAYILTNRAQSKISERYAHTILVSAEKAMPATVREEGVDMMTETRTIPLKQQQHFVLVHGIGGGSWCWYKIQCLMENSGYKVSCIDLKSAGIDRSDADSVVSFDDYNQPLMDFMSSMPENEQVILVGHSAGGLSITQACHKFSKKIRLAVYLAATMLKLGFQTEEDMKDGIPDLSEFGDVYELGFGLGNDKPPTSAVVKKEFQRKIIYHLSPREDSTLAAMLLKPGPVQALTSARFDEEGEVEKVRRVYVRTKQDKVVKGEQQEAMIKKWPPCAVYELDSDHSPFFSTPFVLFGLLVKAAAAFDVGFNFLSQS 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1054 325 FunFam putative methylesterase 11, chloroplastic 61 314 - -
Lele28g1054 325 Gene3D alpha/beta hydrolase 59 315 IPR029058 -
Lele28g1054 325 SUPERFAMILY alpha/beta-Hydrolases 65 309 IPR029058 -
Lele28g1054 325 Pfam Alpha/beta hydrolase family 67 301 IPR000073 -
Lele28g1054 325 PANTHER METHYLESTERASE FAMILY MEMBER 63 312 IPR045889 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1054 Lele-ChrLele28 6843032 6846467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1054 61 168 Miscellaneous Gene Families AT5G10300 41.667 5.01e-28 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0124 01 725542 729406 Lele28g1054 28 6843032 6846467 CCT
Lele03g0123 03 695231 699711 Lele28g1054 28 6843032 6846467 CCT
Lele25g1055 25 6824671 6827256 Lele28g1054 28 6843032 6846467 hybridization
Lele26g1061 26 6868421 6871004 Lele28g1054 28 6843032 6846467 hybridization