LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g1050	ATGATGTTCAAGTCCTTAATTTCTGCATTTGTTTCTCTGAGCTTCTTACTATTCTTCTTCTCTGGCATAACTGTAGCTGATCTGAACTCTGATAGACAAGCTCTCTTAGAGTTTGCTTCCAGTGTCCCTCACGCCAGAAGACTCAACTGGAATTATTCTGCTCCAATTTGCACCTCATGGGTGGGTGTGACTTGCAACTCAGATAAAACTCGGGTCATTGCTATCCATCTTCCAGGAATTGGCCTCAAAGGTCACATTCCAGAAAGCAGCATAGGAAAACTAGATGCCCTTACAGTTCTGAGTCTTCACACCAATGGCCTTAATGGGAAGCTTCCTTCAGACATCCTTTCAATTCCTTCACTTGAGTATGTACACCTCCAGCAGAATAATTTCTCAGGTCCAATCCCTTCATCTGTCTCTCCTAAACTCATTGCACTTGATATTTCTCTCAACTCCTTCTCTGGCACTATCCCACCTACATTTGTCAATCTTAGAAGACTTACCTGGTTGTATTTTCAAAACAATTCCATCTCTGGACCTATCCCTGACTTCAACCTCCCAAAGCTCAAATTTCTTAATTTGAGTTATAATAACTTGAGTGGCTCAATTCCAAACACCATCCAGAAATTTCCACACACTTCTTTTCTTGGGAACTCTCTTTTGTGCAGGCCACCTCTGAATCATTGCTCTGCAATTACCCCTTCTGGATCTCCTCCTCCATCTGCTAACCATTCAGGCACTCCAGCAAGTACCCAAGGTCAAAAAGCTACCAACCCAAAGAAAAGACTTGGATTGGCTTATATACTTGCTCTGGTAATTGGGGGCTGTGCATTCCTAGCTCTCCTAGTTTTGGTAATCTCTTTGCGCTGTTGTAAGAAGAAAAACGGTCAAACCAGTGGCATACTGAAAGCAAAGGCAGTTTGTGCAGGAAAGAATGAGATTTCAAAGAGTTTTGGAAGTGGAGTACAAGAAGCTGAGAAGAACAAGTTGTTCTTCTTCAGAGTCCCAAAAACAACAATAGGAAACAGGGGAGAAGGAAGAACTCGATTAGACTGGGATGCAAGAATGAAGGTCTCACTTGGAGTCGCCAAAGGAATCGCTTTCATACACTCCGAAGGGGGTCCAAAATTCACACACGGCAACATCAAGTCCACCAATGTCCTCCTAACCCAAGACCTCGATGGCTTCATCTCCGACGTCGGACTGCCTCCGCTGATGAGCACCCCGGCAACCATGTCCAGATCTAACGGATACCGCGCGCCAGAGGTGACGGACGCCCGAAAAATCACCCACAAATCCGATGTGTACAGCTTCGGGGTGCTCCTCCTGGAAATGCTGACGGGGAAATGCCCTATGAGATACCCTGGGCACGACGAGGTGGTGGATCTTCCGAGGTGGGTGAGGTCCGTGGTTCGAGAGGAATGGACGGCAGAAGTATTCGATGAGGAGCTATTGAGAGGGAGATACGTGGAAGAGGAAATGGTTCAGATGCTTCAGATTGCGCTGGCGTGCGTAGTGAAGACGCCGGATATGAGGCCGAGGATGGAGGAAGCGGTGAGAATGATGGAGGAAATCAGGCAGCCGGAGTTGAAGAACCGGCCGTCCTCCGAGTCGGAGTCGAATTTGCAAACACCTTGA	1638	0.4701	MMFKSLISAFVSLSFLLFFFSGITVADLNSDRQALLEFASSVPHARRLNWNYSAPICTSWVGVTCNSDKTRVIAIHLPGIGLKGHIPESSIGKLDALTVLSLHTNGLNGKLPSDILSIPSLEYVHLQQNNFSGPIPSSVSPKLIALDISLNSFSGTIPPTFVNLRRLTWLYFQNNSISGPIPDFNLPKLKFLNLSYNNLSGSIPNTIQKFPHTSFLGNSLLCRPPLNHCSAITPSGSPPPSANHSGTPASTQGQKATNPKKRLGLAYILALVIGGCAFLALLVLVISLRCCKKKNGQTSGILKAKAVCAGKNEISKSFGSGVQEAEKNKLFFFRVPKTTIGNRGEGRTRLDWDARMKVSLGVAKGIAFIHSEGGPKFTHGNIKSTNVLLTQDLDGFISDVGLPPLMSTPATMSRSNGYRAPEVTDARKITHKSDVYSFGVLLLEMLTGKCPMRYPGHDEVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVVKTPDMRPRMEEAVRMMEEIRQPELKNRPSSESESNLQTP	545

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g1050	545	FunFam	Leucine-rich repeat receptor-like protein kinase	30	140	-	-
	Lele28g1050	545	Gene3D	Ribonuclease Inhibitor	185	230	IPR032675	-
	Lele28g1050	545	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	337	536	-	-
	Lele28g1050	545	ProSiteProfiles	Protein kinase domain profile.	267	530	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele28g1050	545	MobiDBLite	consensus disorder prediction	525	545	-	-
	Lele28g1050	545	FunFam	Leucine-rich repeat receptor-like protein kinase	141	229	-	-
	Lele28g1050	545	SUPERFAMILY	L domain-like	41	226	-	-
	Lele28g1050	545	Pfam	Leucine rich repeat N-terminal domain	29	66	IPR013210	-
	Lele28g1050	545	PANTHER	OS05G0588300 PROTEIN	11	334	-	-
	Lele28g1050	545	Pfam	Protein kinase domain	353	520	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele28g1050	545	Pfam	Leucine Rich Repeat	188	210	IPR001611	GO:0005515
	Lele28g1050	545	Gene3D	Transferase(Phosphotransferase) domain 1	340	543	-	-
	Lele28g1050	545	MobiDBLite	consensus disorder prediction	233	256	-	-
	Lele28g1050	545	SUPERFAMILY	Protein kinase-like (PK-like)	347	523	IPR011009	-
	Lele28g1050	545	Gene3D	Ribonuclease Inhibitor	28	184	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g1050	Lele-ChrLele28	6832263	6834600	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g1050	341	542	Receptor kinase-like Gene Family	AT5G05160	55.238	6.39e-70	234

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lele28g1050		Pkinase	1.5e-18	CL0016