LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g1028	ATGGGAGGTGTGAAGCAATGGTTGATGTCTTCAACGTCGCAGGCTGTAATAAGTATGTTATTGGTGCAAGTTTTCGCAACAGGGATGCAGTTATTGTCGAGGGTGATTCTGGTCGAGGGCACTTTCATTTTCTCACTCATTGTTTATCGTCATGTCGTTGCTACTCTTTGTGTTGCCCCTTTTGCTTTCTACTTCGAAAGAGGCCAGGCTAAGAAGTTGGGTTGGTCGGTCTGGTGCTGGGTTTTTCTCAATGCATTAGTTGGGATAATAATGGCAATGGGATTCTTCTATTATGGTATACGAGACACTTCAGCAACTTATTCAGTTAACTTTCTCAACTTGGTTCCCGTATTCACCTTTTTAGTCTCCATCATATTCAGGATGGAGAAGCTTGGACTAAAAACATGGGCGGGTAAAGCCAAGTTAATTGGCACAAGTATCTGTGTTGGAGGAGCATTAATCACTTGCCTTTACACAGGAAAGAAATTTTATATTGGTCAGCATAGTCATCGTTCCTCTCACACTGCTGCTTCAACAGAATCAGCCAAGACTCACATGCTTCGAGGCACTCTCTTTCTAGTTGCTAGCTGCTTCTCATATACTGCATGGTTTATTTTCCAAGTGAAGTTGTTGAAAGCTCTTCCTTTGAAGTTTTGGGCAACAATGTTAACTTGTATCATGGCGTCAATTCAAGCTGCAGTAATAGGGTTATGCATAGACAGTAGGAAAGCTTCTTGGTCTTTAGGATGGAATATGGAACTGATCACTATAGTATACTCGGGGGCTCTTGCTACAGCTGCTACATTCTGCTTAATATCTTGGATTGTTACGTTAAAGGGGCCTACTTATCCTGCAATGTTTAATCCAATGGCTCTTATCTTTGTAGCTTTTTTAGAAGCTATTTTATTGGGTGAACCACTCAAAGTTGGAACCTTGGTGGGCATGGTTTTGATCATAGCTGGCTTGTACTGCTTCTTGTGGGGTAAAACAAAGGAGACACATCATGACGTGGCCCAACCAAATGAAGCAGCTATTGAAGTTTCCACAATTACGCCTGCTGATTTTGCTGGTATGCAATCAACAGCAAGAGTAACTCCAAGTTCTTCATCAAATAATGCAGTTATCGACATCGAAAATACTAATATAATAAAAAAAGACCCTAAATTTTAA	1170	0.4085	MGGVKQWLMSSTSQAVISMLLVQVFATGMQLLSRVILVEGTFIFSLIVYRHVVATLCVAPFAFYFERGQAKKLGWSVWCWVFLNALVGIIMAMGFFYYGIRDTSATYSVNFLNLVPVFTFLVSIIFRMEKLGLKTWAGKAKLIGTSICVGGALITCLYTGKKFYIGQHSHRSSHTAASTESAKTHMLRGTLFLVASCFSYTAWFIFQVKLLKALPLKFWATMLTCIMASIQAAVIGLCIDSRKASWSLGWNMELITIVYSGALATAATFCLISWIVTLKGPTYPAMFNPMALIFVAFLEAILLGEPLKVGTLVGMVLIIAGLYCFLWGKTKETHHDVAQPNEAAIEVSTITPADFAGMQSTARVTPSSSSNNAVIDIENTNIIKKDPKF	389

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g1028	389	Pfam	EamA-like transporter family	16	138	IPR000620	GO:0016020
	Lele28g1028	389	Pfam	EamA-like transporter family	188	326	IPR000620	GO:0016020
	Lele28g1028	389	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	250	331	-	-
	Lele28g1028	389	PANTHER	WAT1-RELATED PROTEIN	15	338	IPR030184	GO:0016020\|GO:0022857
	Lele28g1028	389	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	49	140	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g1028	Lele-ChrLele28	6686464	6690323	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g1028	17	366	Nodulin-like Gene Family	AT1G09380	31.793	3.92e-64	207