Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1020 ATGTATGCGTGCATGTGCATATTTTCCTTTTCCAAGTGCATCGTCACAAGTGTCATCAAGATTAAACTGCGAAGTGCCAAAAGGAAACTCTTCCTATTTCAAACTAAACCAAAATTCAGGTCTACTTTGCATTCATTGTTTCAGGGAAAGCATTATAGCTGTCTTCCTGATACGATTTAGTGTGACATTGTAGCTGGGAAAATGAATTCAAAGAAGCTAAATTTTGCAACTTTAGTTATGCTCATATATTTAGTGTCTCAAAATGTTAACTCTGAGCTTCAGGTTGGGTTTTACAGCGATTCATGTAGATTTGTGGAGTTCATTGTGAAGGATGAGGTAAGAAAAGGGTTCATTCAAAACCCTGGGATTGCTGCTGGGCTTGTGAGAATGCACTTCCATGATTGCTTTGTCAGAGGGTGTGATGCATCGGTGCTTTTAGATTCCACAGCTTCAAACACAGCAGAAAAGGACTCACCAGCAAATAAGCCAAGTCTGAGAGGATATGAAGTGATTGACAAAGCTAAAGAAAGACTTGAAGCAGTTTGCAAAGGAACTGTTTCATGTGCTGATATAATTGCTTTTGCAGCAAGAGATAGCATTGAGTTAAGTGGAGGAGTTGGGTATGATGTTCCAGCAGGAAGAAGAGATGGGAAAATATCACTTGCTTCAGACACAAGGAACCTTCCCCCGCCAACTTTCAACCTTGACCAACTAACTCAACTCTTTGCAAGCAAGGGCCTCACAAAAGAAGAAATGGTTACCCTTTCTGGGGCACACACCATTGGACGCTCATTTTGCTCTTCATTCAGCAGCAGATTATACAATTTCAGTAGCACTTCAAGTGTGGATCCAAGTTTAGATTCAGCATATGCATCCCAATTGAAGCGTCAATGTCCTCAGGGAACCACCAACCCAGTGGTTCCCATGGATCCTTCTAGTCCTGCAAGAGCAGATTCAGGTTACTATCTGAATCTTTTGGCAAATAGAGGTCTGTTTTCATCAGATCAAGCTCTCTTGTCCGGCACAGCAGCAGTTGCGCAGGTGAAGCAGTATGCGAGGAATCCGTTTCTGTGGATGAACAAATTTGCGGATGCAATGGTCAAGATGGGTCAGATTGGAGTGTTAACTGGGAATGCTGGAGAGATCAGAACAAATTGCAGGAAGGTTGTTCGGTGGGACCATCTTATTCATGGTGCTCCCTCTGCTTCCTTAGCCAACAAAGTGAAATGGAAGGAAGAGAAGTGTGAAAGTGCTTAA 1257 0.4256 MYACMCIFSFSKCIVTSVIKIKLRSAKRKLFLFQTKPKFRSTLHSLFQGKHYSCLPDTIXCDIVAGKMNSKKLNFATLVMLIYLVSQNVNSELQVGFYSDSCRFVEFIVKDEVRKGFIQNPGIAAGLVRMHFHDCFVRGCDASVLLDSTASNTAEKDSPANKPSLRGYEVIDKAKERLEAVCKGTVSCADIIAFAARDSIELSGGVGYDVPAGRRDGKISLASDTRNLPPPTFNLDQLTQLFASKGLTKEEMVTLSGAHTIGRSFCSSFSSRLYNFSSTSSVDPSLDSAYASQLKRQCPQGTTNPVVPMDPSSPARADSGYYLNLLANRGLFSSDQALLSGTAAVAQVKQYARNPFLWMNKFADAMVKMGQIGVLTGNAGEIRTNCRKVVRWDHLIHGAPSASLANKVKWKEEKCESA 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1020 418 PANTHER PEROXIDASE 25-RELATED 81 383 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 ProSitePatterns Peroxidases active site signature. 124 135 IPR019794 GO:0004601
Lele28g1020 418 PRINTS Plant peroxidase signature 102 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Plant peroxidase signature 126 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Plant peroxidase signature 324 341 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Plant peroxidase signature 166 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Plant peroxidase signature 185 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Plant peroxidase signature 204 219 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Plant peroxidase signature 364 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Plant peroxidase signature 250 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Plant peroxidase signature 308 323 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Haem peroxidase superfamily signature 124 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Haem peroxidase superfamily signature 186 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Haem peroxidase superfamily signature 204 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 PRINTS Haem peroxidase superfamily signature 310 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 ProSiteProfiles Plant heme peroxidase family profile. 92 390 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 SUPERFAMILY Heme-dependent peroxidases 92 389 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 Gene3D - 96 389 - -
Lele28g1020 418 FunFam Peroxidase 96 242 - -
Lele28g1020 418 CDD secretory_peroxidase 92 389 IPR033905 GO:0004601|GO:0042744
Lele28g1020 418 FunFam Peroxidase 229 369 - -
Lele28g1020 418 Gene3D Peroxidase, domain 2 229 369 - -
Lele28g1020 418 Pfam Peroxidase 109 354 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1020 418 ProSitePatterns Peroxidases proximal heme-ligand signature. 251 261 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1020 Lele-ChrLele28 6633860 6636666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1020 70 389 Peroxidase AT5G51890 47.368 2.28e-94 285