Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1012 ATGGGCGAGGTTGTGTTGAGTTCTGAGAAGGTTCTGGAAGCGGAGGAGGTAGAGACCGAGACCTATAAGCAGAAGGAGACGGCGGAGGAGGAAGGGAGTGAAACAGAGAGTAAAGATGAGGAATTGAATAATGGATTGATGAGGTGGAAGAAGTTCCTGCCCAAGATGACATTGAGGGTGTTATTGGCTGAAGCTGATGATTCTACACGGCAGATTATATCTGCGCTTCTCAGGAAATGCAGCTACAGAGTGGCTGCTGTTTCTGATGGCCTGAAGGCATGGGAAATACTGAAGGGAAGACCACACGATGTTGATCTTATACTAACAGAAGTAGATTTGCCATCAATATCTGGCTATAGTCTTCTCACATTAATTATGGAGCATGAAGTTTGCAAAAACATTCCTGTTATAATGATGTCTTCGCAAGATTCAATCAACACAGTCTACAAATGCATGTTGAGAGGTGCTGCTGACTACCTTGTTAAGCCCCTCAGGAAAAACGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCTTCAACCTCTGTCGTAAACGTTCTTGAAGATGAGAGTGTTGCACAACTGAAGGCTGAGGCCACTGCTGAAAACAATGCTCCAGATAATCATTCAAGTGGCGATGCTGCATGCATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCTTGTGGAAAGCCTGATTTCGAAGCTGAGAGTGCTCCAGTGGATCATGTGTACGAATCCTCCCAACCAAAACGTGTTGAACCATCCCCAAGAGAAACAAAGATGCAGGAGGTTGAAATGCGCATTCAAGTAGGCCAGACCTTGACTGTGCATGACAATCACGCAGGAGGATTAACAGTTGAGATCCGCAAAAATGGTGAGACTAATTCAGCATACGGCAAGGATGGTGACCAAGAACATTTTACGATTCCTGACACCAATTGGGAGGCTTATGACAATCACAATGTTCAAATTACCTCTTCAAAGGAAGCTATTGACTTGCTTGGAGCATTTCCAAATCATCCAAAAAGCAGTCACAAAAGTTCCTCAGTCAATTGCACGGGCATGTTTGACTTTTCTCCTCAGCTGGATCTTTCCTTAAGAAGATCTCATCCCAGCAACTTTGAGAACGTAGCTACTAAAGAAAGGCATGCCCTGATGCATTCTAGTGGCTCAGCTTTCAGGCGGTATACTAATGGGCAAACACAAGCCCCGCTTGGAGTGTCCATAAACTGCTGCAATCAAGAAAGAGAACAGAGAACAAATTGTGAGAACAATATCTCTAACATTGTAGGCTATAGCTCAGACAATTCAATGCCTAATTTGCAAAGAAGTCTTGTGTCTTCAGCTACACCGCAGTCAAAAGAATCTGAGCCCACAACTTCACCCTCCCAGTGTAGGCTTTCACTTCCAATCCCAGTAAAAGCTGTAAGGTACGATGATCCACGCACAGCCTATGGTTCTGCACATCTTCCTATGTTCCGTACACAATCAGGCCCCTCGTCAACACTTAATCCAGACTCAGTTCCACACCGTGAACCAACCTTTCAAGTGAATGGTTTTTATCAGTCAAATACCAAAGAAATCAACAGTTCAGAGCAGGTTTATGAACCTCAAGGTCAAAATGGAAACAACACAAGCCACATTGTGTACATGCAGGAAAGCAATTTAGAACATGTGGAGGATCGAAGACATATATCTGCCACGACGGGTCAAAGCGCCTGCACTAACAGCAATGCCGACCAGGGTGCTATAGCCAGGGCAGCTTCAGAGACAATGACTGAAGACCTCACAAATAATGGGAGTTCTTATCGATCTCTCCGAAGAGAAGCAGCTCTAAACAAATTTCGCTTGAAACGGAAAGAGAGATGCTTTGAAAAGAAGGTTCGGTATGAAAGCCGAAAGAAACTCGCAGAGCAGCGTCCTAGAGTGAAGGGACAATTTGTTCGTCAAGTGCAGCAAGATTCCCAGGCTGCACAAAAAGCCCGTTGA 2013 0.4451 MGEVVLSSEKVLEAEEVETETYKQKETAEEEGSETESKDEELNNGLMRWKKFLPKMTLRVLLAEADDSTRQIISALLRKCSYRVAAVSDGLKAWEILKGRPHDVDLILTEVDLPSISGYSLLTLIMEHEVCKNIPVIMMSSQDSINTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTSVVNVLEDESVAQLKAEATAENNAPDNHSSGDAACIQRNKELIEKGSDAQSSCGKPDFEAESAPVDHVYESSQPKRVEPSPRETKMQEVEMRIQVGQTLTVHDNHAGGLTVEIRKNGETNSAYGKDGDQEHFTIPDTNWEAYDNHNVQITSSKEAIDLLGAFPNHPKSSHKSSSVNCTGMFDFSPQLDLSLRRSHPSNFENVATKERHALMHSSGSAFRRYTNGQTQAPLGVSINCCNQEREQRTNCENNISNIVGYSSDNSMPNLQRSLVSSATPQSKESEPTTSPSQCRLSLPIPVKAVRYDDPRTAYGSAHLPMFRTQSGPSSTLNPDSVPHREPTFQVNGFYQSNTKEINSSEQVYEPQGQNGNNTSHIVYMQESNLEHVEDRRHISATTGQSACTNSNADQGAIARAASETMTEDLTNNGSSYRSLRREAALNKFRLKRKERCFEKKVRYESRKKLAEQRPRVKGQFVRQVQQDSQAAQKAR 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1012 670 Gene3D - 56 241 - -
Lele28g1012 670 MobiDBLite consensus disorder prediction 441 474 - -
Lele28g1012 670 SUPERFAMILY CheY-like 58 184 IPR011006 -
Lele28g1012 670 Pfam Response regulator receiver domain 60 171 IPR001789 GO:0000160
Lele28g1012 670 CDD psREC_PRR 60 163 - -
Lele28g1012 670 MobiDBLite consensus disorder prediction 641 670 - -
Lele28g1012 670 Pfam CCT motif 616 658 IPR010402 GO:0005515
Lele28g1012 670 MobiDBLite consensus disorder prediction 254 269 - -
Lele28g1012 670 ProSiteProfiles Response regulatory domain profile. 59 177 IPR001789 GO:0000160
Lele28g1012 670 MobiDBLite consensus disorder prediction 15 40 - -
Lele28g1012 670 ProSiteProfiles CCT domain profile. 616 658 IPR010402 GO:0005515
Lele28g1012 670 SMART REC_2 58 173 IPR001789 GO:0000160
Lele28g1012 670 MobiDBLite consensus disorder prediction 229 269 - -
Lele28g1012 670 PANTHER TWO-COMPONENT RESPONSE REGULATOR 58 266 IPR045279 GO:0009736
Lele28g1012 670 MobiDBLite consensus disorder prediction 654 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1012 Lele-ChrLele28 6593314 6597218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1012 337 660 Response Regulator Gene Family AT5G24470 34.940 6.16e-33 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Lele28g1012 Response_reg 1.8e-20 CL0304