Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1008 ATGGGAATGCTCTTCTCTTTGTTTCAAGAAATCGGGTTGGGCTATGAGGAAACCCAAATGCTGTTGGCCAATCACCCTGAGCTTGCAATGATATCTCTGGATAAATTACGCGCTCGGGTTCGTTCTTTGCAGTCTTTTGTTGGGTTTGATCGTCTTGCTCTGCTGAACTTAGTCGCAAAGCGTCCAAATGTATTAACAGCCACGGAAATTGACGATTTGATATGTTTTGTGCGTGATGAATTGGAAAGTCAGATAAATCAAGCACAGATGCAACGCCTATTATCCGGTACAGAACCCAGATTTCTTGTGGGTTTTGATCGAAAGGTCAAACTGCTTCTCAACAGAGGAATTCCCCGTGAAAAGATTGTTCATGTGCTCAACAATGTGAATTTAACAAAGGCAGTGTGTTATAGGTCCGTGGATGAAATCAATAGAACAATAGATTTCTTAGATCCCTTTGGTGGCATTAATTTAATTGTAAGGCGTCCTGCAATTTTCAATTATGATTTAGATAATCAACTGATTCCAAGAACCAAATACTTGATTGAGCTTAGCGGAGGAGATGAGGATGGCACCGGGAAGGTGCTGCGTAAGCTGCCGGCAATTTTGAGTTACCGTGTGGAGCACGTAGAGGGCCATGTAGAGTTCCTGAGGTCTTTTGTAGGCTTGAATGATGGAGAAATATTTCGTATAATAATGGTTTTTCCAAGTATTGTTAGCGCTAGCAGGGAGAGGAAGCTGCGTCCTAGAATAGAGTTTCTCAAGGATTGTGGGTTGAATTCAGATGAAATCTTCAAGTTCTTGATAAAAGCTCCTTTATTTCTAGGCCATTCATTTCATGAGAACATTGCATATAAACTTGTGTTTCTGGTCAAGATTGGGTATGAATATAGGACAAAGGATTTGGCAACGGCAGTTGGATCTACCACTAGGACAAGCTGTGAGAATTTGCAGAAGGTGATTAGTCTATTCTTGAGTTATGGGCTTTCATGCGAAGACATAGTTGTTATGAGCCAGAAGCATCCTCAGATACTGCAGTACAATCATTCATCTCTAGAGAAGAAGATGAAGTACCTAATAGAGGAGATGGATCGTGACATTGACGAGTTACTGGCATTTCCTGCATTCCTTGGTTACAAGCTGGACGACAGAATTAAACAAAGGTTTGAAGAAAAGAGCGAGAAAGGAACAAGAATGTCTCTTAACAAGCTTTTAACTATTTCATCTGAAAGATTCACAAGGAAAAGAAAGAAGGCCTCTGAGAAACTCATGGAATAG 1278 0.4077 MGMLFSLFQEIGLGYEETQMLLANHPELAMISLDKLRARVRSLQSFVGFDRLALLNLVAKRPNVLTATEIDDLICFVRDELESQINQAQMQRLLSGTEPRFLVGFDRKVKLLLNRGIPREKIVHVLNNVNLTKAVCYRSVDEINRTIDFLDPFGGINLIVRRPAIFNYDLDNQLIPRTKYLIELSGGDEDGTGKVLRKLPAILSYRVEHVEGHVEFLRSFVGLNDGEIFRIIMVFPSIVSASRERKLRPRIEFLKDCGLNSDEIFKFLIKAPLFLGHSFHENIAYKLVFLVKIGYEYRTKDLATAVGSTTRTSCENLQKVISLFLSYGLSCEDIVVMSQKHPQILQYNHSSLEKKMKYLIEEMDRDIDELLAFPAFLGYKLDDRIKQRFEEKSEKGTRMSLNKLLTISSERFTRKRKKASEKLME 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1008 425 SMART mt_12 335 366 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 SMART mt_12 193 224 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 SMART mt_12 367 398 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 SMART mt_12 229 260 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 SMART mt_12 156 187 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 SMART mt_12 19 50 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 Coils Coil 409 425 - -
Lele28g1008 425 Gene3D Transcription termination factor 3, mitochondrial 186 422 IPR038538 -
Lele28g1008 425 Gene3D Transcription termination factor 3, mitochondrial 2 185 IPR038538 -
Lele28g1008 425 Pfam mTERF 6 255 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 Pfam mTERF 250 412 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 Pfam mTERF 189 292 IPR003690 GO:0003690|GO:0006355
Lele28g1008 425 PANTHER CGI-12 PROTEIN-RELATED 8 184 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1008 Lele-ChrLele28 6572387 6573744 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele28g1008 mTERF 1.3e-20 No_clan