Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1006 ATGGCTGCTGGAGAGTTGGCTTGCACATACACATCCTTAATTCTCCATGATGATGGAATAGCAATTGAGCTGAAGAAGAAGAACATTGAGTATCTCATTTTGAATGCTGGTTCGGGTGGTGCTGCTGCTTTAGCTGTTGCTGCTCCTGCTTCCAGTGCTTCCGCCGGAGGAGATGCTGCAGCCGCCCCTGCCGCCGAGGAGAACAAGGAAGAAGCCAAGGAAGAGAGCGATGATGACATGGGGTTCAGCTTATTTGACTAG 261 0.5057 MAAGELACTYTSLILHDDGIAIELKKKNIEYLILNAGSGGAAALAVAAPASSASAGGDAAAAPAAEENKEEAKEESDDDMGFSLFD 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1006 86 Pfam 60s Acidic ribosomal protein 23 85 - -
Lele28g1006 86 Gene3D - 2 37 IPR038716 -
Lele28g1006 86 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P1 24 86 - -
Lele28g1006 86 MobiDBLite consensus disorder prediction 54 86 - -
Lele28g1006 86 MobiDBLite consensus disorder prediction 64 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1006 Lele-ChrLele28 6559829 6561235 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1006 1 86 Cytoplasmic Ribosomal Protein Gene Family AT5G24510 37.719 6.27e-16 65.1