Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0998 ATGAAGATGGTGCCTCATAATCACCACCACCGTCCATTATCGCCATTTGATAACTATTCATGTGATGGCGATGGCCCCACAACTTGTTCTTCTGTCTCTACTATGTATAATATGACTCATCATCATCATCATAATACTATAAACCATGTTAGTGGAGCTTCTGCTTCTCCTGCTGCTGTTGCTGCTGTAAGAACTTTGCAGCCTTTTGACATTTCCACTCGCCCTGCCTTCAAATCCCCAGGGGCGATGGCGGCTTCATTAGGATTCCCTTTCACAAGTGCTCAATGGAAGGAACTAGAAAGGCAGGCTATGATTTACAAGTACATGATGGCTTCTGTTCCTGTTCCTCCCAATCTCCTAATCCCCACCGCTCTCACCTCTGCTTCTTGCTCTCCCTTTGCTGGTGGTTTCAATCTGAGGCTGTCTAGTGGCAGCGCTGATCCAGAGCCAGGGAGGTGCAGGAGAACAGATGGGAAAAAATGGAGATGTTCTAGAGATGTGGCTCCTAACCATAAGTATTGTGAGCGTCATATGCACAGAGGTCGTCCCCGTTCAAGAAAGCCTGTGGAAGTTCAAACCGACGGCGGCACCACCACCCCCATCACCACCGACGGCAACCAGCAAAACAAAAGGGCTCGCCAAGATTTTCATAATTATCCTTATCCTACTTCTGCTGTTACTGTGGCTGTTCCTAATCCCACGGTTACAAATGGTGGATCTTCTTCTCAGTTTCTTCAGTCTACCTCTACTAGTCAGACATTTCATGAATCTTCAATTTCTCTTGACAAGTATGGTGTCAAAGCTGCTAATTTTGGATCTTTGGCTGCTGTGCCATCTGATACCCAACCCAGGGCCTTGGAGTGGATGCTGAAGGGAGATCCCATTTCCATGGCTGCTTCTGATCCAGAATGGCAGCCTCTGATGCAAGCTAAAGCTGATCTGATTAAACAGACTTCAAGTTACGAAGATGCTCTGTATCTCAGTTCCTATGCGTCTTTCAACTCAGGACTGGACCAACAAAACAGTCGTTGCTCTCTGTTCCTCAATCCTCTTCTTCCCATGGAGAATCAAGAGTCCCTAAAACCCAGGGGATTCATTGACGCTTGGTCTAATGCTGAAACAGGGGGAGACAATAATAATAATAGCAACGCCAGCAAAAGCCCTGTTTCGTCAAATGCAAAACTGTCCCTTTCTTCTCTTGATCTATCGATGGGTGGTGGCTCCGTGGTGGAGGAAGATATGGGTTCTATTCATATGGGTTTAGGTTTAATGGAGCCTGACGGAACCACAGAAAATGGCAACAAAACCCATCTTTCTAATTGGCTCACTTCTTCTGCACCGTGGCCAGGTTCAACACCTGGGGGTCCCCTGGCTGAGGTTCTTAGGCCAAGCACGGCGGCCTCCAGTCCGCCGTCTCCGGTGATAACAAATGCAGAATCTAGCAGTCCTCTGGCAACAATGTTGTCATCTCCATCTGGGGTTTTGCAGAAAACATTGGGATCCATGTCTGATTGTAGTAGTAATAGTAGCCCAACAGTGGCATCTTCAAGGGCCAATTCTGAGTTTGCCTTGCTCTTGTTCAATAAAGAAAATTAG 1596 0.4706 MKMVPHNHHHRPLSPFDNYSCDGDGPTTCSSVSTMYNMTHHHHHNTINHVSGASASPAAVAAVRTLQPFDISTRPAFKSPGAMAASLGFPFTSAQWKELERQAMIYKYMMASVPVPPNLLIPTALTSASCSPFAGGFNLRLSSGSADPEPGRCRRTDGKKWRCSRDVAPNHKYCERHMHRGRPRSRKPVEVQTDGGTTTPITTDGNQQNKRARQDFHNYPYPTSAVTVAVPNPTVTNGGSSSQFLQSTSTSQTFHESSISLDKYGVKAANFGSLAAVPSDTQPRALEWMLKGDPISMAASDPEWQPLMQAKADLIKQTSSYEDALYLSSYASFNSGLDQQNSRCSLFLNPLLPMENQESLKPRGFIDAWSNAETGGDNNNNSNASKSPVSSNAKLSLSSLDLSMGGGSVVEEDMGSIHMGLGLMEPDGTTENGNKTHLSNWLTSSAPWPGSTPGGPLAEVLRPSTAASSPPSPVITNAESSSPLATMLSSPSGVLQKTLGSMSDCSSNSSPTVASSRANSEFALLLFNKEN 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0998 531 Pfam QLQ 90 122 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele28g0998 531 MobiDBLite consensus disorder prediction 179 209 - -
Lele28g0998 531 PANTHER GROWTH-REGULATING FACTOR 5 62 398 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lele28g0998 531 ProSiteProfiles QLQ domain profile. 90 125 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele28g0998 531 Pfam WRC 148 190 IPR014977 -
Lele28g0998 531 MobiDBLite consensus disorder prediction 372 391 - -
Lele28g0998 531 MobiDBLite consensus disorder prediction 371 391 - -
Lele28g0998 531 MobiDBLite consensus disorder prediction 191 209 - -
Lele28g0998 531 SMART QLQ_2 89 125 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lele28g0998 531 ProSiteProfiles WRC domain profile. 147 191 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0998 Lele-ChrLele28 6508820 6511095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0998 61 461 GRF Transcription Factor Family AT4G24150 32.783 2.60e-38 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lele28g0998 WRC 5.6e-21 No_clan