Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0995 ATGGGGCATTGTTGCAGCAAAAGCGTTTCCGTCGTCAACAATGAAACTGTTACAGCCGATCACCGCCCTAAATCGCCACAGCCGGCGGCATCGCCCCTGCCGTCCGGCAACTCAGTGTCAGGAGCTGGTTATGCAACCCCTGGTAGGAATACTCCCGCTCACTCCTTCTCCACTAGTCCCTTCCCGAGCCCTCTCCCGCCTGGGGTGGCACCATCCCCGGCTAGAACTCCGGGTAGGAAATTCAGATGGCCTCTCCCACCTCCATCGCCAGCGAAGCCGATCATGGCGGCGTTACTGAGACGGCAGGGGAAGGCGAAACCGAAGGATGGCCCGATACCCGAGGAGCAAACCGAAGGTGGGGAGGGAGAGAGGCCGTTGGACAAGAGCTTCGGATATGCAAAGAATATTGGGGCAAAGTACGAGCTGGGAAAAGAAGTAGGTCGAGGACATTTTGGTCATACTTGCTGGGCGAAAGCAAAGAAGGGAGACCTCAAGGGCCAATCCGTAGCTGTAAAAATCATATCGAAAGCTAAGATGACAACAGCAATAGCAATTGAAGATGTAAGGAGGGAGGTGAAGATGTTGAAGGCCTTATCTGGACATAATAATTTGGTGAAATTTCATGATGTATTTGAGGATGCCAATAACGTCTACATAGTGATGGAATTGTGTGAGGGTGGAGAACTACTTGACAGAATTCTTTCAAGAGGTGGAAGATACACAGAGGATGATGCTAAAGCAATTCTTGTACAAATTCTAGATGTAGTTTCCTTTTGTCATCTCCAAGGAGTTGTTCACCGTGATCTAAAACCAGAGAATTTTCTTTTTGTCTCAAAAGAAGATGAATCTCTGATGAAAGTTATTGATTTTGGTCTATCGGATTTTGTTAGGCCAGATCAACGCCTCAATGATATTGTTGGCAGTGCCTACTATGTTGCACCTGAAGTGCTCCATAGATCTTACAGTGTTGAAGCAGACTTGTGGAGCATCGGAGTTATTACGTACATATTGTTATGTGGAAGCAGACCATTCTGGGCACGCACTGAATCGGGAATCTTCCGGTCTGTGCTAAGAGCTAATCCTAACTTTGATGATTCACCTTGGCCATCAATATCACCAGAAGCTAAAGACTTTGTAAAGAGGCTTTTGAACAAGGACCATAGAAAAAGGATGACTGCTGCTCAAGCTCTAGCTCATCCTTGGTTGAGAAATGAAAACCGTGCCATTCCATTGGACATTTCAATCTTCAAGTCAGTTAAGTCATATGTGCGGGCCACGCCTTTCAAACGAGCAGCACTGAAGGCTCTCTCAAAAGCATTGACAGAAAATGAACTCATCTTTCTGAGAGCACAGTTTAGCCTATTAGAACCAAACAATGGTGCCGTTTCCCTTGACAATTTTAGAGCGGCTCTCGTGAAAAATGCTACTGATACCATGAAGGAATCGAGAGTCCCCGACATTTTAAATTTGATGGAGCCGCTGGCTTATAAAAAAATGGATTTTGAAGAGTTTTGTGCCGCCGCGCTCAGTGTATACCAGCTCGAGGTTAATGAAGACTGGGAGAGAATTTCAACCGCTGCTTTCGAGCATTTCGAACAGGAAGGAAACAGAGTAATTTCAGTCGAGGAGTTGGCGCAGGAAATGAATCTGGGTCCTTCAGCTTACCCCGTACTAAGTGATTGGATCAGGAAATCTGATGGAAAACTAAGTCTCAATGGATACACCAAGTACATGCATGGTGTCACAATACGTAGTTCAAATCCAAGATCGCGACAACTAGTTGCACATGGTACTACTATCTTGCAAGGGATTATGGGATTTCGTGTGGAGATTAAACACGTTTCTGTTATGGTCAAAAACCAGTTCATACCTCCATGTGAGAATTGA 1887 0.4584 MGHCCSKSVSVVNNETVTADHRPKSPQPAASPLPSGNSVSGAGYATPGRNTPAHSFSTSPFPSPLPPGVAPSPARTPGRKFRWPLPPPSPAKPIMAALLRRQGKAKPKDGPIPEEQTEGGEGERPLDKSFGYAKNIGAKYELGKEVGRGHFGHTCWAKAKKGDLKGQSVAVKIISKAKMTTAIAIEDVRREVKMLKALSGHNNLVKFHDVFEDANNVYIVMELCEGGELLDRILSRGGRYTEDDAKAILVQILDVVSFCHLQGVVHRDLKPENFLFVSKEDESLMKVIDFGLSDFVRPDQRLNDIVGSAYYVAPEVLHRSYSVEADLWSIGVITYILLCGSRPFWARTESGIFRSVLRANPNFDDSPWPSISPEAKDFVKRLLNKDHRKRMTAAQALAHPWLRNENRAIPLDISIFKSVKSYVRATPFKRAALKALSKALTENELIFLRAQFSLLEPNNGAVSLDNFRAALVKNATDTMKESRVPDILNLMEPLAYKKMDFEEFCAAALSVYQLEVNEDWERISTAAFEHFEQEGNRVISVEELAQEMNLGPSAYPVLSDWIRKSDGKLSLNGYTKYMHGVTIRSSNPRSRQLVAHGTTILQGIMGFRVEIKHVSVMVKNQFIPPCEN 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0995 628 ProSiteProfiles Protein kinase domain profile. 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0995 628 FunFam Calcium-dependent protein kinase SK5 312 407 - -
Lele28g0995 628 FunFam CDPK-related kinase 1 133 228 - -
Lele28g0995 628 Gene3D Transferase(Phosphotransferase) domain 1 229 417 - -
Lele28g0995 628 SUPERFAMILY Protein kinase-like (PK-like) 139 424 IPR011009 -
Lele28g0995 628 MobiDBLite consensus disorder prediction 59 73 - -
Lele28g0995 628 SMART serkin_6 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g0995 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Lele28g0995 628 FunFam CDPK-related kinase 1 438 509 - -
Lele28g0995 628 CDD STKc_CAMK 139 401 - -
Lele28g0995 628 MobiDBLite consensus disorder prediction 102 128 - -
Lele28g0995 628 SUPERFAMILY EF-hand 435 580 IPR011992 -
Lele28g0995 628 FunFam CDPK-related kinase 3 132 304 - -
Lele28g0995 628 Gene3D Phosphorylase Kinase; domain 1 133 228 - -
Lele28g0995 628 Gene3D - 441 509 - -
Lele28g0995 628 Gene3D - 418 578 - -
Lele28g0995 628 MobiDBLite consensus disorder prediction 31 58 - -
Lele28g0995 628 PANTHER SERINE/THREONINE-PROTEIN KINASE 124 566 - -
Lele28g0995 628 ProSitePatterns Protein kinases ATP-binding region signature. 146 172 IPR017441 GO:0005524
Lele28g0995 628 MobiDBLite consensus disorder prediction 15 128 - -
Lele28g0995 628 Pfam Protein kinase domain 140 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0995 Lele-ChrLele28 6480282 6486670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0995 1 585 EF-hand Containing Proteins AT3G50530 57.410 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lele28g0995 Pkinase 2.1e-70 CL0016