Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0953 ATGTCTGGCCGAAGAACTTCATCAAAACTCTCAGAGAATGAGATTAATGAGATTGTTTCCAGTTTACAGACTGTACTTCCTCGACTGAACCGAAGAACCAACTCAAGGGCATCAGTATCGAAGATTGTGAAAGAAGCTTGCTCTCACGTCAAGAAGCTTCAGAAAGAGGTGGACCAGCTCAGTGAGAAACTTTCAGGGCTCATGGATTCTGCGGATATCAGTGATATTGATGAACAAAGCCTTCGAAATATTCTTCAACAATGA 264 0.4205 MSGRRTSSKLSENEINEIVSSLQTVLPRLNRRTNSRASVSKIVKEACSHVKKLQKEVDQLSEKLSGLMDSADISDIDEQSLRNILQQ 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0953 87 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 8 68 IPR036638 GO:0046983
Lele28g0953 87 Coils Coil 43 70 - -
Lele28g0953 87 PANTHER DNA BINDING PROTEIN 1 87 IPR044172 -
Lele28g0953 87 Gene3D - 4 86 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0953 Lele-ChrLele28 6224570 6224953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0953 7 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 36.250 4.65e-14 60.1