Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0951 ATGTTTCGATATGGGCTCTTAGATGAGAGTCAAAACAAGCTCAATTACGTCTTGACTTTGACTGTGGAGAACTTCTTCGAGCGTCGTCTTCACACACTCGTCTTCAACTTTGGGGTGGCCAAGTCTATTCTTCATGCTAGGGTTCTCATCAGGCAGAGACATATCAGGAAATTAATTTCTATGTCTCTTTGGCTTGCTAGGGTTGGGAGGCAGGTGGTGAACATCCCATCATTCATGGTTCGAGTTGATTCCCAAAAGCATATTGACTTTTCACTTACAAGTTCTTTTGGGGGCGGTCGTCCTGGAAGAGTGAAGAGAAGGAACCAAAGGGCTGCTACCAAGAAGGCTGCTGGCGGAGATGGAGATGAGGAGGATGGGGAGTAA 384 0.4661 MFRYGLLDESQNKLNYVLTLTVENFFERRLHTLVFNFGVAKSILHARVLIRQRHIRKLISMSLWLARVGRQVVNIPSFMVRVDSQKHIDFSLTSSFGGGRPGRVKRRNQRAATKKAAGGDGDEEDGE 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0951 127 MobiDBLite consensus disorder prediction 95 127 - -
Lele28g0951 127 PANTHER 30S 40S RIBOSOMAL PROTEIN 1 114 IPR022801 GO:0003735|GO:0015935|GO:0019843
Lele28g0951 127 TIGRFAM uS4_arch: ribosomal protein uS4 2 96 IPR005710 GO:0003735|GO:0006412|GO:0015935
Lele28g0951 127 CDD S4 28 83 - -
Lele28g0951 127 Gene3D - 27 96 IPR036986 GO:0003723
Lele28g0951 127 SUPERFAMILY Alpha-L RNA-binding motif 12 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0951 Lele-ChrLele28 6217805 6218676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0951 1 117 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 74.359 1.36e-56 172