Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0944 ATGGGGAAGAAGAGTGGGGGTGGTTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGTCTTCGTCTAAGGACTCGCCCGTGCCAGAGAGGAAGAAGGAAGATGAATTGAAACGGCAACATGAAGCGCCCGAGGTTGTTTTGTTTGAGCATTTTCCTGCAGAGAGTTCTCCTGGTGATATTACCAATGAGGAGAGTACCACATCCACACCTGTGACTGAAGATAGACGACATGCCGTTGCTGTTGCTGCAGCAACAGCTGCAGCTGCTGAGGCAGCAGTTGCAGCCGCTCAAGCAGCGGCAAGAGTTGTTCAGATGGCAGGTTATGGACATCAATCCGAGGAAGATAGAGCAGCAACAATCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCACGGCGTGCTTTGAAGGGATTGGTGAGACTGCAAGCGCTTGTGAGAGGTCACAATGTGAGGAAGCAAGCGCAAATGACAATGCGTTGTATGCAAGCGTTGGTGAGAGTGCAGGGCAGAGTTAGAGCTCGCAGGCTCCAGCTGACTCATGACAAGCTTTACAAGAACGTGATGGAACATGATTTAGGTCCCATGAGGCCCATGTACGAGCATGGCTGGGACAATAGGCGTCACAGTTTCCAGAGAATCAATCAAAGTGACTTGTGGAAACATGAAGATGCAATGAAGAAGGAGAGAGCTCTTGCTTACGCTTTTAACTATCAGCAACAGAACCTGTCACCACAAGGAGGCCTGACTGTTCGTGAAGAAATGGAAACATATTCCAATGAGCTTGAACAAGCCAAGCGGGGTTGGCACTGGTTAGAGAGTTGGATGTACTCTCAACAACATCAAGCCAGGCACCTGGGGCCGCCTGAGACCTCTTATTACATGACCCACACTGCTACACCCACCACCGAAGATGACGTGTCCGAGAAGACGGTGGAAATGGACATTGTTGCCCCCCCAAGCTCAAGCAACACCATCATGGGCCAAGGCTTGCTTTTGGATTCAAGCCCACTTTCCAATAGGCGGCTCAATGACCTGCAGCCTCAGCCCAACACTGGTGTGCCTAGCTATATGGCCCCAACCCAGTCTGCAAAGGCCAAGGTAAGGGGTCAGGGCCCGGTCAAGCCACATGGCTCCCCAGGGCCGCAGTGGAATTCTTCAACAAGGAAGGGCTCCGTTATTAGGCCGGGCTGTGATCCCGCGAGCTCAGCTGGAGGTTCGGAAAGTTACCTGTTTATGAGGAGCCCGGGCCCGAAGGTTAGTGGGGCCCGCGTACAGTCTAGACGGATCGCTGGTGGAAGCTCAGATTATGTTGGTACTGAGGATTGGACACTGCCTCTAGGAGCCCATGCTTGGGCATGA 1362 0.5228 MGKKSGGGWFSSVKKVFKSSSKDSPVPERKKEDELKRQHEAPEVVLFEHFPAESSPGDITNEESTTSTPVTEDRRHAVAVAAATAAAAEAAVAAAQAAARVVQMAGYGHQSEEDRAATIIQSYYRGYLARRARRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQGRVRARRLQLTHDKLYKNVMEHDLGPMRPMYEHGWDNRRHSFQRINQSDLWKHEDAMKKERALAYAFNYQQQNLSPQGGLTVREEMETYSNELEQAKRGWHWLESWMYSQQHQARHLGPPETSYYMTHTATPTTEDDVSEKTVEMDIVAPPSSSNTIMGQGLLLDSSPLSNRRLNDLQPQPNTGVPSYMAPTQSAKAKVRGQGPVKPHGSPGPQWNSSTRKGSVIRPGCDPASSAGGSESYLFMRSPGPKVSGARVQSRRIAGGSSDYVGTEDWTLPLGAHAWA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0944 453 Pfam Protein of unknown function (DUF4005) 347 377 IPR025064 -
Lele28g0944 453 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Lele28g0944 453 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Lele28g0944 453 Pfam IQ calmodulin-binding motif 115 131 IPR000048 GO:0005515
Lele28g0944 453 MobiDBLite consensus disorder prediction 16 73 - -
Lele28g0944 453 MobiDBLite consensus disorder prediction 333 427 - -
Lele28g0944 453 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
Lele28g0944 453 Gene3D - 111 165 - -
Lele28g0944 453 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Lele28g0944 453 MobiDBLite consensus disorder prediction 333 359 - -
Lele28g0944 453 MobiDBLite consensus disorder prediction 21 46 - -
Lele28g0944 453 SMART iq_5 112 133 IPR000048 GO:0005515
Lele28g0944 453 SMART iq_5 134 156 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0944 Lele-ChrLele28 6172114 6175644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0944 1 393 IQD Protein Family AT3G49260 51.860 2.50e-100 306