Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0930 ATGAGAGGATTTGGGGTGAAATGGATGTTATATGTACGATCTAGAGAAGACAAGAAAGTTCCAAAAAGAACAGATGGACAGGGGAAGAAAGCATTCTGCACAATTAGCTCTGAGTTTAGCTTTCTAAACCGTGTTTGTATTGGAGAAATGTATGCAGAGACTGGCCTTCTTTTCCCGTATTTCCAGAATTTCTCCCAAGAACTTCAACAGCTTGAGGAGTACTGCAAAACCCACAAGACCAATGCTTCTATGAGTGACATTTTCAGCTCTTCTGCCATATCCCAGTATGATTTGGCGGCAGAGGGGGATCTGTTCAAGGCTCCTGAACCTATTAGCGAAGAACCGGTCATGGACCTGGATCCTGTGGCAGCAGCCATCTCAATGATATCCTGTGGTGAAGATGTTGTCTCCTCACAGGGACTAGCATCCACAGACATCGATGCTCTTCAAAGCGAGCAACTTCTGAGTGAGGTATTCTACGAGTGCAAAAAGGATCTTTTAGAGAAGACTGCAATCAAGTCATCACTATGTGAGATTCTGGATATCAAGGTTCCTGTTCTCGATACAGATGAAAGTAAAATTCAAGTAAACAAACAAATTACCGACATTCCATTACCGAAAAGTGTCAGTTTGGGATGTTTGAGCTCAATTGACTGGATGCAAGGATCTGTAATCAAGCCTGCTTTTCTTGAATTCCCAGGAATAGATTTCAACGAGGTTTATGGCATGCGAAGGGCATTTAGCGAAGGAGATATTAAGGCTTTGAGTAATGGCAATGGTAATGTGAACGTCATTCAATCTTCTCTTGAGAGGCCCCTTGTTATCAGCAACTGTAACAGTGAGGAGCGCAGGGAAAAGCTCTCCAGATACAGGAACAAGAAGACCAAGAGAAATTTTGGCAGGAAAATCAAGTATGCTTGCCGGAAGGCTCTGGCCGATAGTCAACCCAGAATCCGAGGAAGATTCGCGAAAACAGAAGAATCGGAGGTCAAGAGGCAATAA 1002 0.4351 MRGFGVKWMLYVRSREDKKVPKRTDGQGKKAFCTISSEFSFLNRVCIGEMYAETGLLFPYFQNFSQELQQLEEYCKTHKTNASMSDIFSSSAISQYDLAAEGDLFKAPEPISEEPVMDLDPVAAAISMISCGEDVVSSQGLASTDIDALQSEQLLSEVFYECKKDLLEKTAIKSSLCEILDIKVPVLDTDESKIQVNKQITDIPLPKSVSLGCLSSIDWMQGSVIKPAFLEFPGIDFNEVYGMRRAFSEGDIKALSNGNGNVNVIQSSLERPLVISNCNSEERREKLSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKTEESEVKRQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0930 333 ProSiteProfiles CCT domain profile. 283 325 IPR010402 GO:0005515
Lele28g0930 333 Pfam CCT motif 283 325 IPR010402 GO:0005515
Lele28g0930 333 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 241 326 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0930 Lele-ChrLele28 6048663 6054257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0930 255 329 C2C2-CO-like Transcription Factor Family AT5G57660 40.260 2.30e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele28g0930 CCT 9.6e-17 CL0281