Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0929 ATGCCGAGTCTGAAACGGTGCAAACTCGGTGACTCGGCTGGGGACGACGATGACTGCTCTGCTGCTCGGAAGAAGAGGAAGACTAATGGGTATTACCCTTTGAATCTTCTAGGCGATGTCGCCGCCGGTATACTTCCTGTTAGCTTCCATGGCTCACTAGGTGCTGGTGTTTCTGATAAGGGCTTATCTGCATCATGGTGTGCGGAGGTCTCGTGCTCCCCTGTTGAGGCGGAGTCAAAGCCCAAGGTTGGGAACTCTGTAACAGCAAGGATGAATCGGCCTGCGGAAGAACCACGGCCGCCGCTGGTCAGAACGTCAAGAGGCCGAGTTCAGGTACTCCCTTCGCGTTTCAACGATTCAGTTATTGAGAACTGGAGGAAAGAAGGTAAGACGAACTCTCGGGATTATAGTTTTGAAGAGGAACTTGATAGTAGAAAGGAGAATAGTTTTAGGACACCGAAATCATACAACCAGAATAGCAGAAAAGGGAGAAACGATAATAAAATTGGCTACAAGTCTCGGAAATATTTGGCATTGTACGAGGAGGAGGATGAGGTAAGAGAGGATGGGCCTGTAAGGTATAGGAATTTGACGAGGAAGTATTCAACTTCTAGCGCACTCAACCCAAAGCGCGAGCAATTAATTGAACACGAGAGACGCGGATTTATGTACATGGAAGAAGTTGATATAACCGGTAACGAGATATTTTTGAAGGAGAATGGCGAGAAAAAGGATGGATTATATGGACCAGAAGACTTTTACGCAGGTGATATAGTGTGGGCCAAAGCAGGGAAGAAGGAGCCCTTTTGGCCAGCCATTGTCATCGATCCAATGTCTCAGGCACCTGAGCTGGTCCTGAGGTCTTGCATAGCTGATGCAGCTTGTGTGATGTTTCTTGGGTACTCTGCAAATGAAAATCAAAGGGACTATGCATGGGTGAAGCATGGGATGATTTTCCCGTTTATAGATTATGTAGACAGGTTTCAGGGACAGGTGGAATTGAGTTACTATAACCCTTCTGATTTTCAAGTAGCAATAGAGGAGGGATTCTTGGCAGATCGGGGATTTACAGAGAAGTTGATAGCAGACATAAATTTAGCAGCTGGCAACACAGGGTATGATGAAACCTTTCCAAGAGGCATACAGGAGGCCCCTGGTTCAAAGCAGTATGCAGGATGTCACTTTCTGAGCCAGGTGCGTTGTGATGGATGTAAAGTTTGGGTGCATGCAGAATGCGACAAAATTTCCAGCAACCTATTCAAGAATCTTGGAGGAACTGATTATTATTGCCCAACGTGTAAAGCGAAGTTTGACTTTGAGTTATCCGATTCAGAAAAGTCACAGCCAAAAGTCAAATGGAACAAGAACAATGGGCAGCTAGTGCTACCAAACAAAGTCACTGTTCTCTGCAATGGTGTGGAAGGCATATATTTTCCTAGCCTTCACTTAGTTGTGTGCAAGTGTGGTTTTTGTGGGACAGAGAAGCAAGCACTTAGTGAATGGGAACGACACACAGGTTCCAAGTCAAGAAATTGGAGAACAAGTGTTAGGGTGAAAGGCTCTATGCTCCCACTGGAACAATGGATGCTGCAGTTGGCAGAATTTCATGCAAATGCTCAAGTTTCTGTCAAACCTAAAAAACCTTCTTTAAAAGAAAGGAAGCAGAAGTTGCTTGCATTTTTACAAGAGTGCTATGGAGCAAGAAATGTTCGAGACTTTACATCATGGGTTTGTAAAGCTTGTGAAACACCTGACATTAAACGAGAGTGTTGTCTATGTCCTGTAAAGGGTGGTGCACTAAAGCCAACCGATGTGGACACACTATGGGTTCATGTCACTTGTGCTTGGTTTCGACCTGAAGTCTCTTTTGCTAGTGATGAAAAGATGGAGCCTGCTTCGGGTATTCTGAGTATTCCATCTAATTCTTTTGTGAAGATTTGTGTTATATGTAAGCAAATTCATGGGTCATGCACGCAATGTTGCAAGTGTTCCACTTATTTCCATGCCATGTGTGCGTCAAGGGCTGGATATCGCATGGAGTTGCATTGCTCAGAGAAAAATGGCAGGCAAACAACAAAAATGGTGTCTTATTGTGCATACCACAGGGCTCCAAATCCAGACACGGTTTTGATTATGCAAACCCCTCTTGGAGTTATTTCTACCAAAAGCCTTCTCCAACATAAGAAAAAATCTGGGTCAAGGTTGATTTCGTCTAATAGAATAAAGCTAGAAGACACTCCTATAGAGAACATCGAGGATGAACCATTTTCTGTTGCAAGGTGCCGTGTAATGGAGGAGCCTCCAGCATTTTCTTCTTTTAGGGAACGTTTGCACCACTTACAGGTAAGTCTTGTGTTTTTCAGTGACATTATGCTTTTGGCGATAAATTCTCTGACTGCAAACTGGGGGGACATACTTCTATCCAGAGAACCGAAAATGAACGGGTTTGCTTTGGTAGATCGGGTTCTTGAATATCGTGGTGAACAAGTAAGACGCAGCATTGCTGATCTGAGGGAGGCGCATTATAAGATAGAAGGCAAAGATTGCTATCTTTTTAAGATAAGTGAAGAAGTGGTGGTAGATGCCACTGATAAAGGAAATATTGCCCGGCTTATCAACCATTCTTGTATGCCGAATTGCTATGCAAGAATTATGAGCGTCGGTGATGATGAGAGCCGTATTGTACTCATCGCCAAGACCAATGTTCCCGCCGGTGATGAACTAACGTATCTCCCTCTCTCTGTTACACTTGTGTTGTCACCCTTTGTATTCCCTTCAATTCTTGAATTTGGTGCGTTGGTTGTTGTATGTGGCAGGTATGACTACTTGTTTGATCCTGATGAACCCGATGAGAACAAAGTGCCATGTTTATGTAAAGCTCCAAATTGCCGGAAATTCATGAACTAG 2907 0.4413 MPSLKRCKLGDSAGDDDDCSAARKKRKTNGYYPLNLLGDVAAGILPVSFHGSLGAGVSDKGLSASWCAEVSCSPVEAESKPKVGNSVTARMNRPAEEPRPPLVRTSRGRVQVLPSRFNDSVIENWRKEGKTNSRDYSFEEELDSRKENSFRTPKSYNQNSRKGRNDNKIGYKSRKYLALYEEEDEVREDGPVRYRNLTRKYSTSSALNPKREQLIEHERRGFMYMEEVDITGNEIFLKENGEKKDGLYGPEDFYAGDIVWAKAGKKEPFWPAIVIDPMSQAPELVLRSCIADAACVMFLGYSANENQRDYAWVKHGMIFPFIDYVDRFQGQVELSYYNPSDFQVAIEEGFLADRGFTEKLIADINLAAGNTGYDETFPRGIQEAPGSKQYAGCHFLSQVRCDGCKVWVHAECDKISSNLFKNLGGTDYYCPTCKAKFDFELSDSEKSQPKVKWNKNNGQLVLPNKVTVLCNGVEGIYFPSLHLVVCKCGFCGTEKQALSEWERHTGSKSRNWRTSVRVKGSMLPLEQWMLQLAEFHANAQVSVKPKKPSLKERKQKLLAFLQECYGARNVRDFTSWVCKACETPDIKRECCLCPVKGGALKPTDVDTLWVHVTCAWFRPEVSFASDEKMEPASGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHCSEKNGRQTTKMVSYCAYHRAPNPDTVLIMQTPLGVISTKSLLQHKKKSGSRLISSNRIKLEDTPIENIEDEPFSVARCRVMEEPPAFSSFRERLHHLQVSLVFFSDIMLLAINSLTANWGDILLSREPKMNGFALVDRVLEYRGEQVRRSIADLREAHYKIEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTNVPAGDELTYLPLSVTLVLSPFVFPSILEFGALVVVCGRYDYLFDPDEPDENKVPCLCKAPNCRKFMN 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0929 968 FunFam Histone-lysine N-methyltransferase 585 704 - -
Lele28g0929 968 Pfam SET domain 851 910 IPR001214 GO:0005515
Lele28g0929 968 MobiDBLite consensus disorder prediction 133 150 - -
Lele28g0929 968 Gene3D - 250 353 - -
Lele28g0929 968 SUPERFAMILY Tudor/PWWP/MBT 248 348 - -
Lele28g0929 968 MobiDBLite consensus disorder prediction 1 20 - -
Lele28g0929 968 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 383 436 IPR013083 -
Lele28g0929 968 MobiDBLite consensus disorder prediction 133 168 - -
Lele28g0929 968 SMART PostSET_3 952 968 IPR003616 -
Lele28g0929 968 ProSiteProfiles PWWP domain profile. 255 324 IPR000313 -
Lele28g0929 968 CDD PHD_TCF19_like 399 433 - -
Lele28g0929 968 SMART set_7 803 922 IPR001214 GO:0005515
Lele28g0929 968 ProSiteProfiles Extended PHD (ePHD) domain profile. 587 702 IPR034732 -
Lele28g0929 968 PANTHER PHD FINGER PROTEINS 63 451 - -
Lele28g0929 968 Gene3D SET domain 819 968 IPR046341 -
Lele28g0929 968 CDD ePHD_ATX3_4_5_like 590 701 IPR041955 -
Lele28g0929 968 Pfam PHD-zinc-finger like domain 589 701 - -
Lele28g0929 968 SUPERFAMILY SET domain 820 968 IPR046341 -
Lele28g0929 968 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 968 IPR025780 -
Lele28g0929 968 ProSiteProfiles SET domain profile. 716 913 IPR001214 GO:0005515
Lele28g0929 968 Pfam PWWP domain 256 348 IPR000313 -
Lele28g0929 968 SMART PHD_3 392 434 IPR001965 -
Lele28g0929 968 SMART PHD_3 646 702 IPR001965 -
Lele28g0929 968 ProSiteProfiles Post-SET domain profile. 952 968 IPR003616 -
Lele28g0929 968 SUPERFAMILY FYVE/PHD zinc finger 398 437 IPR011011 -
Lele28g0929 968 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 583 704 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0929 Lele-ChrLele28 6036156 6044018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0929 564 701 C2H2 Transcription Factor Family AT3G14740 33.333 8.32e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele28g0929 SET 3.8e-11 No_clan