Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0924 ATGAAGAACCTAAAACGTCATCCGCCGTCTTCCACGGCGAATTTCCGGCGATTAGACACTGATTCCAAAGCACTGTGCCCTGATACTGTTATGAATTTGAAGAATGCTCGGCTTAGAAGACTTAAAATCCAGCGGTTGAAGTTGAAGTATACTTGTGAAGCCAAAATCCATGTCGCCCCCGGTGACCGTGAGGAGGGGACCCAGTGTCCGGACTCGGAAGGTAAAGATAGAACGGTTCGCGAATCGATGCAGATATCATTGTCGTTAACGACGTCGTCGAAGGAGGAGGATCGGTTGAGGTTGGCGGGAAACAACGGCGTTCTGGTGGATGCTCTGAGAGGTGAGAAACACAGAGAGGATTGCTGTGATGTGGAGAATTTATCTTACGGTTCGGTGTCCTTGATAGGTAGAAGGAAAGAGATGGAAGATGCGGTAAGCATAGAGGTGGGGTTTGTGGTGAAGGAGAGAACCAAGTGTGACTTCTTCGCGGTTTATGATGGCCACGGTGGGGCCCAGGTGGCGAAAGCGTGCCGAGAGCGGTTGTACCAATTGGTGGCAGAGGAGTTGGAGAGGCATGGAAGAAATGGTGGCGAAGTGGATTGGGAGGGAATGATGGAAGGATGTTTTGGTAAAATGGATTGCGAACTGGCAGATAATGCGGCGGTTCGGACGGTGGGATCTACGGCGGTTGTGGCCGTAGTGGCAAAGGATGAGGTGGTTGTGGCCAATTGCGGCGACTGTAGGGCGGTGATGGGAAGAGGAGGTGAGGCTTTCGCCTTGTCGGATGATCATAAGCCTGACAGGCCCGATGAGTTTATGAGAATAGAAGCCGCCGGTGGAAGGGTCATAAACTGGAACGGCCAACGCGTTCTAGGAGTTCTTGCCACCTCCAGATCTATTGGAGACCAATACCTTCGACCTTACGTAATATCGAAACCAGAAGTGACGGTGACAAAGCGAACTAGCAAGGATGAGTTTCTTATACTGGCGAGTGATGGCTTGTGGGATGTGATCTCCACTGAAGCTGCTTGTGAGGTTGTAAGGAAGTGTCTCAGTGGCCAAGCCAGGCGGCGGAATTCGCCGCAGCTGGAAATTGAAAATCAAAGCCCCGCCAGTGAGGCCGCAGCTCTCTTAGCTGAACTAGCAATGGTAAAAGGAAGCAGAGATAACACAAGTGTCATCGTAGTTGAGCTCAAGAGCCATAACAATAATAACAAATAA 1221 0.507 MKNLKRHPPSSTANFRRLDTDSKALCPDTVMNLKNARLRRLKIQRLKLKYTCEAKIHVAPGDREEGTQCPDSEGKDRTVRESMQISLSLTTSSKEEDRLRLAGNNGVLVDALRGEKHREDCCDVENLSYGSVSLIGRRKEMEDAVSIEVGFVVKERTKCDFFAVYDGHGGAQVAKACRERLYQLVAEELERHGRNGGEVDWEGMMEGCFGKMDCELADNAAVRTVGSTAVVAVVAKDEVVVANCGDCRAVMGRGGEAFALSDDHKPDRPDEFMRIEAAGGRVINWNGQRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTSKDEFLILASDGLWDVISTEAACEVVRKCLSGQARRRNSPQLEIENQSPASEAAALLAELAMVKGSRDNTSVIVVELKSHNNNNK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0924 406 FunFam Protein phosphatase 2C 51 121 406 - -
Lele28g0924 406 CDD PP2Cc 128 398 IPR001932 -
Lele28g0924 406 PANTHER PROTEIN PHOSPHATASE 93 398 - -
Lele28g0924 406 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
Lele28g0924 406 Gene3D - 124 406 IPR036457 -
Lele28g0924 406 SMART PP2C_4 118 396 IPR001932 -
Lele28g0924 406 Pfam Protein phosphatase 2C 129 391 IPR001932 -
Lele28g0924 406 ProSiteProfiles PPM-type phosphatase domain profile. 128 398 IPR001932 -
Lele28g0924 406 SUPERFAMILY PP2C-like 126 400 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0924 Lele-ChrLele28 5994522 5996971 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0924 123 399 PP2C-type Phosphatase Gene Family AT2G29380 49.831 2.61e-88 270