Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0920 ATGGTTTACAGCAGTTGTCTAAGGTCTTTGGTTGTTCAACTTGGATCCTTCACCAATAAAGTGCCATTCTACAACATTGTGAGAAGTTTGCATAAAGTTCCCTCCATTACTTATTCGTGGAATCGTGGATTTAAGACAAGAATAGGGATGATGGTTAATACAGGTGATATGTCAAACGCTGGACCCATTGTAGATATGTTGCCAGAAAAAGATGATGACGGTGGGTTTGCCAGTGGAGGGTGGAAAAGTGAAGATGGAAGACTTCGCTGTGGGTATTCAAGTTTTAGAGGAAAAAGGGTTACCATGGAGGATTTTTATGATATTAAGATATCAAATATTGATGGTCGATCGGTTTGCTTGTTTGGAATATTTGATGGTCATGGTGGTTCTCGTGCTGCTGAGTATTTGAAGGAGCATCTCTTCAATAACCTCATGAAGCATCCAAAATTTTTGACTGATACCAAATTGGCTATAAGCGAAACTTATCAACAGACGGATGCTGATTTTCTTGATTCTGAAAGGGATACTTTCCGGGATGATGGTTCTACAGCTTCAACTGCAGTTTTGGTTGATAACCATCTCTATGTTGCCAATGTTGGAGATTCTAGGACCATAATATCAAAAGCTGGTAAAGCCATAGCTCTCTCTGAGGATCATAAGCCAAATAGAACTGATGAACGGAAGAGAATTGAGAATGCTGGGGGTCTTGTAATGTGGGCAGGTACTTGGAGGGTAGGAGGAGTGCTAGCAATGTCCCGTGCTTTTGGTAACCGTATGCTGAAGCAGTATGTTGTGGCAGAACCTGAGATCCAGGAACAGGTAATAGATGAAGAGCTGGAGTTGCTGGTACTTGCAAGTGATGGACTATGGGATGTATTATCAAATGATGACGCTGCTTCTCTTGCCCGTGCTGAAGATGAACCCCAAGCAGCCGCTCGTAGGCTAACTGAAGCCGCATTTAGTCGGGGTAGTGCAGATAACATTACATGCATTGTGGTGCGGTTCCATCATGATAAAGCAAACCCAGCTAATTTTGAGGAAGCAGGTCCAGGATCCAGCTAG 1062 0.4294 MVYSSCLRSLVVQLGSFTNKVPFYNIVRSLHKVPSITYSWNRGFKTRIGMMVNTGDMSNAGPIVDMLPEKDDDGGFASGGWKSEDGRLRCGYSSFRGKRVTMEDFYDIKISNIDGRSVCLFGIFDGHGGSRAAEYLKEHLFNNLMKHPKFLTDTKLAISETYQQTDADFLDSERDTFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRTDERKRIENAGGLVMWAGTWRVGGVLAMSRAFGNRMLKQYVVAEPEIQEQVIDEELELLVLASDGLWDVLSNDDAASLARAEDEPQAAARRLTEAAFSRGSADNITCIVVRFHHDKANPANFEEAGPGSS 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0920 353 FunFam Probable protein phosphatase 2C 76 81 341 - -
Lele28g0920 353 SUPERFAMILY PP2C-like 85 336 IPR036457 -
Lele28g0920 353 Gene3D - 80 349 IPR036457 -
Lele28g0920 353 ProSiteProfiles PPM-type phosphatase domain profile. 89 335 IPR001932 -
Lele28g0920 353 CDD PP2Cc 89 335 IPR001932 -
Lele28g0920 353 Pfam Protein phosphatase 2C 90 328 IPR001932 -
Lele28g0920 353 SMART PP2C_SIG_2 71 335 IPR001932 -
Lele28g0920 353 SMART PP2C_4 79 333 IPR001932 -
Lele28g0920 353 PANTHER PROTEIN PHOSPHATASE 77 335 - -
Lele28g0920 353 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0920 Lele-ChrLele28 5952988 5958592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0920 1 346 PP2C-type Phosphatase Gene Family AT5G53140 67.877 2.54e-177 497