Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0918 ATGATGGATTGCAACAAAGATGAGGCTTTTAGGGCCAAGGAAATAGCTGAGAAGAAATTTTCAGACAGGGAATATGCTGGTGCTAAGAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCTCTGGATGGTCTTTCACAGTTTTTGACCAACCTTGATGTTTACATCTCTGCTGAGAATAAAGTTAGTGGAGAAATGGATTGGTATGGTATACTTGGAGTGAACCCCTTTGATGATGAAGAGACAGTTAGAAAACAGTACAGGAAGCTGGCTCTCACTCTTCACCCAGATAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTGTCAGATAAAACCAAGAGACTAGAATATAACCTGAAGAGGAGTTTGAAAGGTTTTCAACATAAAACTCCCAACCATGCTGGATCTCAATCAGAAGTACCTGGTTCAAATGGTTTTTATAATTTCAACAAGAATGTAACTTCAAATGTGAGGGCTGGAAATAGTAATGCCCAGGCACGCCATGCCTCAGCTCCTCGTCCACAGAAGAAGGCTGACACCTTTTGGACTGTTTGTAATCGATGCAGGACTCATTATGAATACCTTAGGGTTTATTTGAATCATAGGCTCCTATGTCCCAATTGTAACGAAGCTTTCTTGGCTATAGAGAAGGAGCCACCTCCCAACTATTTCAAGTCAACAAATTGGCCTTCACGCCAGCAGCATCAGAGTTCTCGACGTCATGCTTCAAGTAATAATCAATCTAATGCTGGAAAAATTTTTACAGTTTCTCAAAATTCAGATGCCAGTGGTACATCAGGCATGTCATCATTTAGTAAAACAAGTTTTCAGTGGGGTCCTCACTCTAGCATGGCTGGTTTTGGTGGTATGGATGGGTCATCTGTTGCTGCTCAAGCTGCAAGTGTTGTGCAGCAGGCTAGTGAAAAAGTCAGAAGGGAACATGACGGAGCACCATCAATTGCTGAATGGGAGAGGAGTCAAATGTCTAAGAGGACTGATGGTTCCTTTCATAAAGTGGAGAAATGGAAGAGGAGGAGGACGGATGATACTGGTACGAATGGTATTAAAGGATACATGGGAAACCATATGACCATGGGACAAGGAGCAGCTGGTATGGGATATTCTTCTGATTCAAGAAAAGGTAACTGGGAAACTGAAAGAAGCTATGGTTTTTCAGGCATGAAGCCCAGCAGCACGAGAGAGTTATCGTTGTTTGAAATCCGAAATATGTTGGTGGATAAGGCACAAAGTGAAATTCGCAAGAAACTTGAAGAATGGAAATTGGTAGCTCAATCTAAGATCACAAGCAAGTCCAAAGAGAATAAGAGACAAAAAAGCACATTGACCAGTAAAACATCTTATCCGAAGAAGCATAAAGAGTTCATTCCTGATAATAGCTGTCAAGTAGAAGGTGATTCTTTTCTTGTCACTTCTGATAATACGGTTAAGGAGGATCAATCCTACATCATAATGAATGTTCCAGACCCTGATTTCCACAATTTTGACTTGGACAGAACTGAAAATGCCTTTGGTGAGGACCAGGTCTGGGCTGCTTATGATGACGATGATGGAATGCCTCGTTACTATGCTCGAATTCACAAGGTGATATCCATGGAGCCATTTAGAATGCGAATCAGCTGGCTTAACTCTAGAAGCAACAGTGAATTGGGTCCCATAGATTGGATAGGTGCTGGTTTTACTAAAACTTGTGGGGACTTTAGGACTGGCAAGCATGAAATAACTGAGTCATTGAATTCATTCTCACACAAAGTTAGTTGGACAAAAGGCACCAGAGGAGTCATTCGCATCTTTCCCCAGAAAGGGGACGTCTGGGCTCTATTTAAGGACTGGTCTCCCGATTGGAACGAACAGACTCCAGATGAAGTGATACACAAATATGATATGGCTGAGGTGCTTGAAGATTTTGACGAGGAGCTCGGTGTATTAATTGCCCCATTGATTAAGTTTCCAGATTTCAGGACTGTGTTTAGAAGGCATGCTGATCCTGATCGGGTGATGAGGATTCCTAAAGAGGAGATGTTTCGTTTTTCTCACCAGGTTCCTAATTACATCCTTACAGGGAAAGAAGCCGATAATGCTCCAGAGGGTTGTCGAGAGTTGGATCCAGCAGCTACACCTTTAGACCTTCTTCGAGCCACTGCGGAATCTAACGAGGGATCGGGTTCTGAAAGGCCTGACGAAGACGCTTTGCCGAATTCAATTGAAATGGAGAAAGCTTCAGAAACAAGAGGAGGGGAACAATTGAAGGAGATTTTTACATAG 2313 0.4246 MMDCNKDEAFRAKEIAEKKFSDREYAGAKKFALKALNLYPALDGLSQFLTNLDVYISAENKVSGEMDWYGILGVNPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNLKRSLKGFQHKTPNHAGSQSEVPGSNGFYNFNKNVTSNVRAGNSNAQARHASAPRPQKKADTFWTVCNRCRTHYEYLRVYLNHRLLCPNCNEAFLAIEKEPPPNYFKSTNWPSRQQHQSSRRHASSNNQSNAGKIFTVSQNSDASGTSGMSSFSKTSFQWGPHSSMAGFGGMDGSSVAAQAASVVQQASEKVRREHDGAPSIAEWERSQMSKRTDGSFHKVEKWKRRRTDDTGTNGIKGYMGNHMTMGQGAAGMGYSSDSRKGNWETERSYGFSGMKPSSTRELSLFEIRNMLVDKAQSEIRKKLEEWKLVAQSKITSKSKENKRQKSTLTSKTSYPKKHKEFIPDNSCQVEGDSFLVTSDNTVKEDQSYIIMNVPDPDFHNFDLDRTENAFGEDQVWAAYDDDDGMPRYYARIHKVISMEPFRMRISWLNSRSNSELGPIDWIGAGFTKTCGDFRTGKHEITESLNSFSHKVSWTKGTRGVIRIFPQKGDVWALFKDWSPDWNEQTPDEVIHKYDMAEVLEDFDEELGVLIAPLIKFPDFRTVFRRHADPDRVMRIPKEEMFRFSHQVPNYILTGKEADNAPEGCRELDPAATPLDLLRATAESNEGSGSERPDEDALPNSIEMEKASETRGGEQLKEIFT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0918 770 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lele28g0918 770 SMART dnaj_3 66 123 IPR001623 -
Lele28g0918 770 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Lele28g0918 770 CDD DnaJ 67 120 IPR001623 -
Lele28g0918 770 MobiDBLite consensus disorder prediction 443 469 - -
Lele28g0918 770 Pfam Domain of unknown function (DUF3444) 500 706 IPR024593 -
Lele28g0918 770 Pfam DnaJ domain 67 128 IPR001623 -
Lele28g0918 770 PANTHER BNAC03G44070D PROTEIN 2 723 - -
Lele28g0918 770 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lele28g0918 770 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele28g0918 770 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lele28g0918 770 MobiDBLite consensus disorder prediction 728 770 - -
Lele28g0918 770 MobiDBLite consensus disorder prediction 234 260 - -
Lele28g0918 770 Gene3D DnaJ domain 64 177 IPR036869 -
Lele28g0918 770 MobiDBLite consensus disorder prediction 737 762 - -
Lele28g0918 770 SUPERFAMILY Chaperone J-domain 59 127 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0918 Lele-ChrLele28 5945808 5948120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0918 5 230 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.333 1.41e-29 119