Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0917 ATGGACCCTGTCACCCTCCTGTGCGGGTCTTTCTCCGGTTATGCGGATTTCTCCCTTTCGCGTCAATGGTTATGCAGATTGTGCAAGTGTCGAGCTTGTGGTCCGTGCACGTGTCAAACATGGGGCCCATGTTTGACTGGGCTTGTTGGTCCACTTTCCGACATGTTTCAGAGGCCATGGTTTGGGAGATCTGACCCCACTACCACCGCTGCTTGCATCTGGCGTACGGAAAGTCGCCACGTGTGGTCAGATCACCCCGTGTGCGGAAGAACAAGCGAGGCAGTGAAGTGTGCGCCGGTAGGAAATAGTGCGGGATTCATTTATATATGTCACATTATCAAGAAGAAGCTAAGCAAGCTGCAAGAGGCAATGGGATTCCAAACACCCCATTCAAGTAAACCCAAATTGCAATCTGTAACCAAACCCATTCCCTCGTCCTACGATTCATGGATGGCGAGGCATCCTTCAGCGTTGCGTTCATTTGATAGATTGATGAAAGCAGCAAGTGGGTTGGACATGGTTTTGTTTTTAGACTATGATGGAACCTTATCACCCATTGTTAATGACCCTGATCGTGCTTTTATGTCTGAGGAGATGCGTGCAGCAGTGTGTGAAGTTGCTAAAAATTTCCCAACTGCAATAATTAGTGGAAGAAGCAGAGACAAGGTTAAAGAATTTGTCAAGTTAAATAATGTGTATTATGCTGGAAGTCATGGGATGGATATAATGGCATCATCAGTGACAGCTAGATCTTCTTCTGATGGCGACCACTACAACATGGCCCTCGACACCACAAAGGACGATGGAGTTCCCTTTCAACCTGCCAAGAAATTTTTGCCTGCTATTCAAGAGGACTACGCTGAATTAGAAGAGAAGGTGAAGTCTGTGCTTGAGAAACATCCAGACTTTTGCTTAACTGAGGGTAAAAAGGTTCTGGAAATAAGGCCATCCATAGAATGGAACAAAGGTCACGCCCTGGAGTATTTTCTGGACACACTAGGGTTAAGCAGTTCCCGCAACATCCTGCCAGTGTACATTGGTGATGATCGAACCGATGAAGATGCTTTTAAGAGGCATGGCAGTGACATACGGTGCAAGTGGCCTATAAATGCAACCAGGAGGAAACGTCAACCAGGGAAGCTAAGAACTGCAAATGGAGATGGAGACCCATTCACAAGATTTCTGAAGCTCATTCGTTATCATCTTTCTCTTTCTACGGCTACACCTTATGGACTAACCATACACATGTCGTGTGGCATCGGTGATTGCGCGGGGATAAAAATGAATGGGAATATTAATGGGTTTGGAAATAGAGGATTCAGCAGTGTGGAGTTAGAGTACATAGGGAGGCACCATAGACACGAACCGGGAGAGAATCAGTGTAGCTCTGCCCTCGTTAAGCATATCAAAGCACCGGTTCCTCTGGTATGGTCTTTGGTGAGGAGATTCGACCAACCACAAAAGTACAAGCCTTTCGTGAGCAGGTGTGTTGTCAAGGGGAACCTTGAAATTGGGAGCCTGAGGGAAGTTGATGTTAAGTCAGGGCTTCCTGCTACTACAAGCACGGAAAGATTGGAGCTTCTTGATGACAATGAACATGTCCTTAGCATCAGGATCATTGGTGGCGATCATAGACTTAGGAACTACTCGTCTATCATGTCTCTCCACCCAGAAATTATCGAGGGAAGGCCAGGCACACTTGTAATTGAATCTTTTGTGGTGGATGTGCCCGAGGGCAACACTAAGGACGAGACCTGCTACTTTGTTGAAGCCCTAATAAAATGCAATCTCAAGTCACTTGCTGATGTCTCAGAAGGGCTGGCAGTGCAGGACCGCACTGAACCGATTGAACCGATGTAG 1860 0.4677 MDPVTLLCGSFSGYADFSLSRQWLCRLCKCRACGPCTCQTWGPCLTGLVGPLSDMFQRPWFGRSDPTTTAACIWRTESRHVWSDHPVCGRTSEAVKCAPVGNSAGFIYICHIIKKKLSKLQEAMGFQTPHSSKPKLQSVTKPIPSSYDSWMARHPSALRSFDRLMKAASGLDMVLFLDYDGTLSPIVNDPDRAFMSEEMRAAVCEVAKNFPTAIISGRSRDKVKEFVKLNNVYYAGSHGMDIMASSVTARSSSDGDHYNMALDTTKDDGVPFQPAKKFLPAIQEDYAELEEKVKSVLEKHPDFCLTEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSRNILPVYIGDDRTDEDAFKRHGSDIRCKWPINATRRKRQPGKLRTANGDGDPFTRFLKLIRYHLSLSTATPYGLTIHMSCGIGDCAGIKMNGNINGFGNRGFSSVELEYIGRHHRHEPGENQCSSALVKHIKAPVPLVWSLVRRFDQPQKYKPFVSRCVVKGNLEIGSLREVDVKSGLPATTSTERLELLDDNEHVLSIRIIGGDHRLRNYSSIMSLHPEIIEGRPGTLVIESFVVDVPEGNTKDETCYFVEALIKCNLKSLADVSEGLAVQDRTEPIEPM 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0917 619 CDD PYR_PYL_RCAR_like 461 605 - -
Lele28g0917 619 Pfam Polyketide cyclase / dehydrase and lipid transport 466 605 IPR019587 -
Lele28g0917 619 Gene3D - 431 614 IPR023393 -
Lele28g0917 619 Coils Coil 279 299 - -
Lele28g0917 619 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 115 295 IPR044651 GO:0004805|GO:0005992
Lele28g0917 619 SUPERFAMILY HAD-like 174 365 IPR036412 -
Lele28g0917 619 FunFam Abscisic acid receptor PYL9 435 614 - -
Lele28g0917 619 SUPERFAMILY Bet v1-like 461 602 - -
Lele28g0917 619 Gene3D - 281 382 IPR023214 -
Lele28g0917 619 Gene3D - 173 259 IPR023214 -
Lele28g0917 619 Pfam Trehalose-phosphatase 287 358 IPR003337 GO:0003824|GO:0005992
Lele28g0917 619 Pfam Trehalose-phosphatase 176 252 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0917 Lele-ChrLele28 5930085 5941805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0917 175 357 Trehalose Biosynthesis Gene Families AT1G70290 28.293 5.57e-08 54.3