Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0911 ATGTGCCTCCACGCGCCCTCTTCCTCCCAAGAAACCCGCGAGTTCTTGATCCAGAGAATCATAGCCGCATTCGAAAAGGCACTTGCAACGGTCAACTGGAACGGTGGCTCGTCGGTTGGAATCCCAACTTCTGAGTCACCACCTTTTAGTGGTAGTCCTCGCAGCGAAGACTCTGACAGGGATTTCCAAGACCAAAACGCCTCCAAAAAGAGAAGCATGCCGAGGTGGGCTAAACAGATTAGAGTTAGCCCAGGGATGGGAGTGGAAGGGACTCTTGACGATGGATACGGCTGGAGAAAATATGGCCAGAAAGAGATTCTGGGAGCCCAGTTTCCAAGAGGGTATTACAGATGCACCCACAGAAATGTCCAAGGATGCTTGGCCACGAAGCAAGTGCAAAGATCTGATGAAGACCCCAATGTATTTGAAATCACCTACAGAGGAAAGCACACCTGTGCACAGTCATCATCCAATGCGGTTCCTCCATCTGGCTCTCAAGAAAGCCATGGACTGAGTCCAAATGCGGCAGATCCTCGGCAATTATCACAAGAACAACAGCTACTTTTGAAACTTCGAGCTGGGCTCAGAGTTCAAACCGACAACCTAGATGTCCCTGATCCGGAACCATCATCATTTACCTCACTTATTTTTGCTTCAACCAGCTCCGCCATTATGAATCATGGAAACCAGATGTTTACAGGCTCCATGCTGGAAAACAATTTTTCCGACAACCTTAATACTTCTGATCCTTCCTATATGTCCCCAGCCACATCAGCAATAACCTACTTTTCGGTGTCTCCAAGTGGAGTCAGGAACATGTTGGGTGAGATGCCAAACGTGGCAACTTCTAGGTCTGAGATCAACGGCATGGTCTCCACCGTTACCTCAGCCGCTAACTCCCCAACCGTGGGTTTAGACCTTCCATTTGATCATCAGTTCGGATATGACGGACACAACTTCACCTTTGATAACCAGCGGCTCTTCTAA 987 0.4873 MCLHAPSSSQETREFLIQRIIAAFEKALATVNWNGGSSVGIPTSESPPFSGSPRSEDSDRDFQDQNASKKRSMPRWAKQIRVSPGMGVEGTLDDGYGWRKYGQKEILGAQFPRGYYRCTHRNVQGCLATKQVQRSDEDPNVFEITYRGKHTCAQSSSNAVPPSGSQESHGLSPNAADPRQLSQEQQLLLKLRAGLRVQTDNLDVPDPEPSSFTSLIFASTSSAIMNHGNQMFTGSMLENNFSDNLNTSDPSYMSPATSAITYFSVSPSGVRNMLGEMPNVATSRSEINGMVSTVTSAANSPTVGLDLPFDHQFGYDGHNFTFDNQRLF 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0911 328 MobiDBLite consensus disorder prediction 39 78 - -
Lele28g0911 328 SMART WRKY_cls 92 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0911 328 MobiDBLite consensus disorder prediction 54 68 - -
Lele28g0911 328 SUPERFAMILY WRKY DNA-binding domain 91 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g0911 328 ProSiteProfiles WRKY domain profile. 87 150 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0911 328 FunFam WRKY transcription factor 53 78 155 - -
Lele28g0911 328 Gene3D WRKY domain 86 155 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele28g0911 328 MobiDBLite consensus disorder prediction 153 180 - -
Lele28g0911 328 Pfam WRKY DNA -binding domain 93 152 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele28g0911 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 44 233 IPR044810 GO:0003700
Lele28g0911 328 MobiDBLite consensus disorder prediction 39 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0911 Lele-ChrLele28 5886557 5887760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0911 7 157 WRKY Transcription Factor Family AT5G24110 52.980 4.22e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele28g0911 WRKY 3.8e-27 CL0274