LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g0908	ATGGGCTTAGCGGTGCTGGAATCTCTCGACACAGCTCGTACACAATGGTACCACATTACGGCCGTCATCATCGCCGGCATGGGCTTCTTCACTGACGCCTATGATCTCTTTTGCATCTCCACCGTCTCTAAACTCTTGGGTCGCTTGTATTACACCGACCCCTTTGCCAACAAACCCGGAGCACTTCCCCACAAAGTTAATAACGCAGTTACCGGAGTCGCCCTCATCGGAACCCTCGCCGGCCAACTATTCTTCGGCTATCTTGGAGACAAGCTCGGTCGCAAGAAAGTTTACGGCATCACCCTCATTCTCATGATCTTTTGTGCCATATGCTCGGGCCTCTCCATGGGTACATCCCCCAAGGCCGTCATGAACTCTCTCTGCTTCTTCAGGTTCTGGCTCGGCTTCGGCATCGGCGGTGACTACCCTCTTTCCGCCACCATCATGTCGGAATACGCTAACAAAAGGACACGTGGCGCTTTCATCGCTGCCGTCTTTGCCATGCAAGGTGTCGGACTCATATGTGCCGGATTGGTGTCAACGGTGGTTTCGCGACTTTTCATATCCGCCTATCCTGCCCCCTCATATAAAGCAAACCCTGCGCTGTCAACACCGCCTGAAGCTGACTTTTTGTGGCGAATAGTTCTCATGGCGGGAGCCATCCCTGCTGCGCTGACATTCTACTGGCGAATGAAGATGCCGGAGACGGGTCGTTACACGGCTCTTATAGACGGAAACGCAAAGCAAGCGGCTGCGGATATGGCCAGAGTTTTGGACATTGAAATCCAAGCGGAACAAGAAAAGTTGGGTCAGATGAAAGCAGCGAATGAGTACACCTTGTTCTCCGATGAGTTCTTCCGGCGACATGGTCGGCATTTGATAGGCACGACGAGCACGTGGTTCTTGTTGGACATCGCGTTCTACAGCCAGAACTTAACCCAGAAGGATGTTTTCTCATCTACAGGGTTGGTTGACAAGCCGGAGACGATGAGTGCTTTAGAGGAAGTGCGCCAGACGTCCCTCGCCATGTTCGTGATTGCCTTGCTGGGCACATTCCCAGGGTATTGGTTCACAGTGTTCTTCATTGAAAAACTTGGACGCTTCAAGATTCAACTCGTTGGCTTCTTCATGATGTCCTTCTTCATGTTCGTGATCGGTATTCGATACGAACACCTCAAAACCGACAAGAACCTCTTCGCTTTTCTGTATGGGCTGACCTTCTTCTTCGCCAATTTTGGCCCCAACAGTACCACCTTCGTGCTTCCGGCGGAGTTATTTCCGACGAGAGTGAGGTCAACGTGCCACGCGCTGAGTGCGGCGTCGGGGAAGGCGGGTGCAATATTGGCGGCGTTTGGGGTACAGACGTACACATTGGATGGGGATGCCAGGAAGATCAAGAAGGCGATGATTCTATTGGCGGTGACCAACCTGGTTGGATTTTGCTGTACATTCTTGGTGACGGAAACCAAAGGACGGTCGCTGGAGGAAATCTCCGGTGAGGATGGGGAGAATGAAACCACCCCAAACCCCCAGATTTCTAGGGCTGCGGAGATGATTCCACAGGGAAGTCGCAATCGCACAGAGTCAATGTGA	1593	0.5242	MGLAVLESLDTARTQWYHITAVIIAGMGFFTDAYDLFCISTVSKLLGRLYYTDPFANKPGALPHKVNNAVTGVALIGTLAGQLFFGYLGDKLGRKKVYGITLILMIFCAICSGLSMGTSPKAVMNSLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGVGLICAGLVSTVVSRLFISAYPAPSYKANPALSTPPEADFLWRIVLMAGAIPAALTFYWRMKMPETGRYTALIDGNAKQAAADMARVLDIEIQAEQEKLGQMKAANEYTLFSDEFFRRHGRHLIGTTSTWFLLDIAFYSQNLTQKDVFSSTGLVDKPETMSALEEVRQTSLAMFVIALLGTFPGYWFTVFFIEKLGRFKIQLVGFFMMSFFMFVIGIRYEHLKTDKNLFAFLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAASGKAGAILAAFGVQTYTLDGDARKIKKAMILLAVTNLVGFCCTFLVTETKGRSLEEISGEDGENETTPNPQISRAAEMIPQGSRNRTESM	530

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g0908	530	MobiDBLite	consensus disorder prediction	495	530	-	-
	Lele28g0908	530	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	21	491	IPR020846	GO:0022857
	Lele28g0908	530	CDD	MFS_PhT	22	490	-	-
	Lele28g0908	530	SUPERFAMILY	MFS general substrate transporter	9	498	IPR036259	-
	Lele28g0908	530	Gene3D	MFS general substrate transporter like domains	17	514	IPR036259	-
	Lele28g0908	530	MobiDBLite	consensus disorder prediction	503	530	-	-
	Lele28g0908	530	Pfam	Sugar (and other) transporter	23	498	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Lele28g0908	530	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	17	495	-	-
	Lele28g0908	530	FunFam	Inorganic phosphate transporter 1-6	17	511	-	-
	Lele28g0908	530	TIGRFAM	2A0109: phosphate:H+ symporter	5	500	IPR004738	GO:0005315\|GO:0006817\|GO:0016020

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g0908	Lele-ChrLele28	5864356	5865948	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g0908	3	500	Inorganic Solute Cotransporters	AT5G43360	62.622	0.0	655

Showing 1 to 1 of 1 entries