LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g0903	ATGAACCTCTTAATAACTTTGTCAGCAGCCTTCGTCATTGGGGCGATTTTCGTGAGTGTTGATGCTGAACCAGTGGAAGACAAAAAAGCGTTGCTTGATTTCTATCGCATTATCGGTCAGTCTCATCCTCTCAACTGGGATGAGAATTCTTCTGCATGCAACAGCTGGAGAGGAATTTTCTGCAACAGCGAACAATCCAGAGTCATAGCGGTCCATTTACCTGGAGCTGGGTTGAGCGGTCCAATCCCATCGAACACTCTGAGTCGTCTCTCAGAACTTCAAACTTTGAGTCTTAGATCCAATAGAATAACTGGTCCTTTTCCTTCTGATTTCTCTGAGCTTAAGAACTTGAGTTATGTTTATCTCCAATTCAACAAGTTTTCCGGTCCATTACCATCGGATTTTTCTGTTTGGAATAATCTTAATGTCATCGATTTATCCAATAATTCTTTTAACGGAAGCATCCCTTCTTCCATTAACAATTTGACTCATCTCACATCTTTAGTCTTAGCCAACAACTCGCTTTCCGGGGAAATTCCTGACCTCGATATTCCCCGCCTAAAAGTGCTCAATTTAGCCAACAACCACCTTAGCGGGGTTGTGCCTAAATCCCTTGAGAGATTTCCAGGTTCAGCTTTTTCTGGTAACAACAATCTTACAACAGAAAATACACTTCCTCCAGCTATTCCACTTCAACCACCAAATGCTCCTCCGAGAAAGAAAACCACTCTAAGCGAGCCTGTATTGTTGGCTGTTATCATTGGTGGCTGTGTGCTAGTGTTTCTGGTGATTGCAGCTTTCATGCTTATACGCAGCTATCAGAAAGCAGACGAAGAAGTGCCAACAGTGAAGTCAAAGAAAAAGGAAGACTCTCTGAAGAAAGAAGTATCTGAAACCGAAAGTCAAGACAAGAACAAGATTGTGTTCTTTGAGGGTCGCCATCTTGCCTTTGACCTGGAAGACCTGTTGCGATCATCTGCTGAGGTACTAGGAAAAGGAACCTTCGGGACAACATACAAGGCTGCTCTAGATGATGTAACCACGGTGGTGGTGAAGAGAATGAAAGAAGTGGTGGTCGGAAAACGCGAGTTTGAACAGCAGATGGAGGTGGTGGGGAGGATTAGGCACGATAATGTGGGTCCACTGAGGGCATATTATTATTCCAAGGAAGAGAAACTTATGGTGTATGATCACTTCGAACAGGGTAGCGTTTCTGCAATGTTGCATGGTAGAAAAGGGGAAGGCAGGGCTTCTTTAAACTGGGATAGTCGGCTGAGAATTGCAATAGGTGCAGCAAGAGGGATGGCTCACATCCACACACAACATGGAGGGAAACTAGTACATGGCAACCTAAAAGCCTCAAACGTCTTCTTAAACTCTCAAGGGTATGGTTGTGTATCTGATGCAGGTTTGGCCACATTAACAAGTTCAATACCCTTATCGCCGCAGAGAAATGGAGGGTACCGGGCACCGGAAGTAACGGACATCAGAAAAGCGAGCCATGCAGCTGACGTATACAGTTTTGGGGTGCTGGTGCTTGAGCTTCTGACAGGGAAATCACCCATACATGCCACGGGGAGTGAGGAAGTGGTGCATCTGGTGAGGTGGGTGAACTCTGTGGTGAGAGAGGAGTGGACTGCGGAGGTGTTTGATGTTGAGTTGCTTAGATATTCAAATATTGAGGAAGAAATGGTAGAGATGTTGCAGATAGGGATGGCATGCGTGGTGAGGGTGCCAGAACGGAGACCGAAAATGCAAGATGTTGTGAGAAAGTTGGAGGAAGTCCGTAAAGTGAACACCGGAACCCAATCATCCACAGAAGGTTCCACCCCAACCCCACAAGCAATTATTGATGTACCTTCTTCGTCTGTTCCAAAATAA	1881	0.453	MNLLITLSAAFVIGAIFVSVDAEPVEDKKALLDFYRIIGQSHPLNWDENSSACNSWRGIFCNSEQSRVIAVHLPGAGLSGPIPSNTLSRLSELQTLSLRSNRITGPFPSDFSELKNLSYVYLQFNKFSGPLPSDFSVWNNLNVIDLSNNSFNGSIPSSINNLTHLTSLVLANNSLSGEIPDLDIPRLKVLNLANNHLSGVVPKSLERFPGSAFSGNNNLTTENTLPPAIPLQPPNAPPRKKTTLSEPVLLAVIIGGCVLVFLVIAAFMLIRSYQKADEEVPTVKSKKKEDSLKKEVSETESQDKNKIVFFEGRHLAFDLEDLLRSSAEVLGKGTFGTTYKAALDDVTTVVVKRMKEVVVGKREFEQQMEVVGRIRHDNVGPLRAYYYSKEEKLMVYDHFEQGSVSAMLHGRKGEGRASLNWDSRLRIAIGAARGMAHIHTQHGGKLVHGNLKASNVFLNSQGYGCVSDAGLATLTSSIPLSPQRNGGYRAPEVTDIRKASHAADVYSFGVLVLELLTGKSPIHATGSEEVVHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVEMLQIGMACVVRVPERRPKMQDVVRKLEEVRKVNTGTQSSTEGSTPTPQAIIDVPSSSVPK	626

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g0903	626	Gene3D	Transferase(Phosphotransferase) domain 1	399	612	-	-
	Lele28g0903	626	MobiDBLite	consensus disorder prediction	598	626	-	-
	Lele28g0903	626	FunFam	pollen receptor-like kinase 1	293	398	-	-
	Lele28g0903	626	FunFam	protein STRUBBELIG-RECEPTOR FAMILY 8	399	606	-	-
	Lele28g0903	626	Gene3D	Ribonuclease Inhibitor	25	231	IPR032675	-
	Lele28g0903	626	SUPERFAMILY	Protein kinase-like (PK-like)	327	593	IPR011009	-
	Lele28g0903	626	ProSiteProfiles	Protein kinase domain profile.	324	595	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele28g0903	626	FunFam	Probable inactive receptor kinase RLK902	24	183	-	-
	Lele28g0903	626	Pfam	Protein tyrosine and serine/threonine kinase	328	592	IPR001245	GO:0004672\|GO:0006468
	Lele28g0903	626	SUPERFAMILY	L domain-like	40	208	-	-
	Lele28g0903	626	ProSitePatterns	Protein kinases ATP-binding region signature.	330	361	IPR017441	GO:0005524
	Lele28g0903	626	MobiDBLite	consensus disorder prediction	595	626	-	-
	Lele28g0903	626	Pfam	Leucine rich repeat N-terminal domain	26	62	IPR013210	-
	Lele28g0903	626	Pfam	Leucine Rich Repeat	186	207	IPR001611	GO:0005515
	Lele28g0903	626	Gene3D	Phosphorylase Kinase; domain 1	289	398	-	-
	Lele28g0903	626	PANTHER	OS05G0588300 PROTEIN	7	605	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g0903	Lele-ChrLele28	5827528	5829498	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g0903	16	607	Receptor kinase-like Gene Family	AT4G23740	54.486	0.0	651

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lele28g0903		PK_Tyr_Ser-Thr	8.3e-31	CL0016