Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g0896 ATGGACATCAACGGTGAGGAGGAAGATGGAGAATTCGAATTCTCCAGAAACTATTTTCTGGCAAAGGAATTGGGCTCCTCGAGCAAGAAATCAACTCGCAAGCTTTCCGACATTGACATTGTTGATGAACAGGAATTGAGGGCTGCAGCAGCCAATATTGAGCCCAAGCATGAGAAGGAGATTACCCCATTAATTAATGGTTATAAAAATATGTATTCTGAATGGGTTTTTGCCCTGAGGTGTGATTTTTCCTTGCTAATGTATGGCTTTGGGTCTAAGAAGGCTGTACTTGAAGATTTTGCTTCGACTGCATTGGCTGAACATTCTGTAATTGTTATCAATGGTTATCTTCCAGCCATTAACTTAAAACAGGTCGGGATAGCTTTAGCTGAAGTGTTGTCGGATCAAGTAAAAACTAAACAGAAGGATTATCGAACTCAAGATTTCATTTAA 453 0.3974 MDINGEEEDGEFEFSRNYFLAKELGSSSKKSTRKLSDIDIVDEQELRAAAANIEPKHEKEITPLINGYKNMYSEWVFALRCDFSLLMYGFGSKKAVLEDFASTALAEHSVIVINGYLPAINLKQVGIALAEVLSDQVKTKQKDYRTQDFI 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g0896 150 Pfam Origin recognition complex subunit 2 31 139 IPR007220 GO:0000808|GO:0005634|GO:0006260
Lele28g0896 150 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 14 144 IPR007220 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g0896 Lele-ChrLele28 5781445 5782497 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g0896 12 131 Core DNA Replication Machinery Family AT2G37560 66.667 6.85e-54 171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0896 28 5781445 5782497 Lele02g0847 02 5151663 5155391 CCT
Lele28g0896 28 5781445 5782497 Lele03g0860 03 5014298 5020054 CCT
Lele28g0896 28 5781445 5782497 Lele04g0863 04 5280963 5289136 CCT
Lele25g0907 25 5800063 5803013 Lele28g0896 28 5781445 5782497 hybridization
Lele26g0912 26 5865360 5867715 Lele28g0896 28 5781445 5782497 hybridization